Variant report

Variant	rs8037681
Chromosome Location	chr15:44873464-44873465
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr15:44872601..44874196-chr15:45017482..45020327,2	K562	blood:
2	chr15:44862990..44865543-chr15:44872481..44874022,2	K562	blood:
3	chr15:44827580..44829719-chr15:44870926..44873715,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000104131	Chromatin interaction
ENSG00000179523	Chromatin interaction
ENSG00000104133	Chromatin interaction

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs16964045	0.98[ASN][1000 genomes]
rs2288340	1.00[ASN][1000 genomes]
rs2291647	0.95[ASN][1000 genomes]
rs2412884	1.00[ASN][1000 genomes]
rs3784568	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7170216	1.00[ASN][1000 genomes]
rs7172726	0.95[ASN][1000 genomes]
rs7173921	0.93[ASN][1000 genomes]
rs7175978	0.93[ASN][1000 genomes]
rs7176018	0.93[ASN][1000 genomes]
rs8028262	1.00[AFR][1000 genomes]
rs8041448	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3386433	chr15:44654644-45037538	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	135 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:44842000-44951600	Strong transcription	Monocytes-CD14+_RO01746	blood
2	chr15:44858000-44900200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr15:44858400-44897200	Strong transcription	Fetal Stomach	stomach
4	chr15:44858600-44877800	Weak transcription	HUVEC	blood vessel
5	chr15:44858600-44880800	Strong transcription	Fetal Intestine Small	intestine
6	chr15:44859000-44875200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr15:44859000-44878800	Weak transcription	Stomach Mucosa	stomach
8	chr15:44859000-44881200	Weak transcription	Fetal Brain Male	brain
9	chr15:44859000-44887800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr15:44859200-44875800	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr15:44859200-44875800	Weak transcription	Small Intestine	intestine
12	chr15:44859800-44880800	Weak transcription	Pancreatic Islets	Pancreatic Islet
13	chr15:44859800-44887600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr15:44860200-44874200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
15	chr15:44860800-44875000	Weak transcription	A549	lung
16	chr15:44861600-44882200	Weak transcription	Psoas Muscle	Psoas
17	chr15:44863400-44874400	Weak transcription	Rectal Smooth Muscle	rectum
18	chr15:44863400-44876000	Weak transcription	Pancreas	Pancrea
19	chr15:44863400-44881000	Weak transcription	Right Ventricle	heart
20	chr15:44863600-44874200	Weak transcription	HSMM	muscle
21	chr15:44865000-44875800	Weak transcription	HMEC	breast
22	chr15:44865200-44874000	Weak transcription	Muscle Satellite Cultured Cells	--
23	chr15:44865200-44874600	Weak transcription	H1 Cell Line	embryonic stem cell
24	chr15:44866000-44875000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
25	chr15:44866000-44875000	Weak transcription	HepG2	liver
26	chr15:44866000-44875400	Weak transcription	Spleen	Spleen
27	chr15:44866200-44874400	Weak transcription	Brain Hippocampus Middle	brain
28	chr15:44866200-44874600	Weak transcription	Brain Angular Gyrus	brain
29	chr15:44866200-44875600	Weak transcription	NHDF-Ad	bronchial
30	chr15:44866200-44875800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
31	chr15:44866200-44875800	Weak transcription	Ovary	ovary
32	chr15:44866400-44875200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
33	chr15:44866600-44874600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
34	chr15:44866600-44875200	Weak transcription	Gastric	stomach
35	chr15:44866800-44875000	Weak transcription	Placenta Amnion	Placenta Amnion
36	chr15:44866800-44875600	Weak transcription	Brain Cingulate Gyrus	brain
37	chr15:44867000-44875400	Weak transcription	Colon Smooth Muscle	Colon
38	chr15:44867200-44874400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
39	chr15:44867200-44875400	Weak transcription	Aorta	Aorta
40	chr15:44867200-44875600	Weak transcription	Brain Germinal Matrix	brain
41	chr15:44867200-44875600	Weak transcription	Duodenum Smooth Muscle	Duodenum
42	chr15:44867200-44875800	Weak transcription	HSMMtube	muscle
43	chr15:44867400-44874200	Weak transcription	Primary hematopoietic stem cells	blood
44	chr15:44867400-44874400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr15:44867400-44874400	Weak transcription	Lung	lung
46	chr15:44867400-44874400	Weak transcription	Stomach Smooth Muscle	stomach
47	chr15:44867400-44874800	Weak transcription	Fetal Thymus	thymus
48	chr15:44867400-44875200	Weak transcription	NHLF	lung
49	chr15:44867400-44875800	Weak transcription	Brain Substantia Nigra	brain
50	chr15:44867400-44875800	Weak transcription	Colonic Mucosa	Colon

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