Variant report

Variant rs8040839
Chromosome Location chr15:44118890-44118891
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:44117000-44119200 Weak transcription Gastric stomach
2 chr15:44117000-44119200 Weak transcription Lung lung
3 chr15:44117200-44119000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr15:44117200-44119000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
5 chr15:44117200-44119000 Weak transcription HSMMtube muscle
6 chr15:44117200-44119200 Weak transcription Spleen Spleen
7 chr15:44117200-44119200 Weak transcription NHDF-Ad bronchial
8 chr15:44117400-44119000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr15:44117400-44119000 Weak transcription NHLF lung
10 chr15:44117400-44119200 Weak transcription Brain Substantia Nigra brain
11 chr15:44117400-44119200 Weak transcription Small Intestine intestine
12 chr15:44117400-44150200 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr15:44117800-44119000 Flanking Active TSS Dnd41 blood
14 chr15:44118400-44119000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
15 chr15:44118400-44119200 Enhancers Fetal Brain Male brain
16 chr15:44118400-44119600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
17 chr15:44118400-44120200 Enhancers Stomach Mucosa stomach
18 chr15:44118400-44120800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
19 chr15:44118400-44120800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr15:44118400-44121000 Active TSS Fetal Kidney kidney
21 chr15:44118600-44119000 Flanking Active TSS Placenta Placenta
22 chr15:44118600-44119000 Flanking Active TSS Fetal Thymus thymus
23 chr15:44118600-44119000 Flanking Active TSS Rectal Smooth Muscle rectum
24 chr15:44118600-44119000 Flanking Active TSS Hela-S3 cervix
25 chr15:44118600-44119200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr15:44118600-44119200 Active TSS Osteobl bone
27 chr15:44118600-44119400 Active TSS HUES6 Cell Line embryonic stem cell
28 chr15:44118600-44119400 Active TSS Brain Anterior Caudate brain
29 chr15:44118600-44119400 Active TSS NHEK skin
30 chr15:44118600-44119600 Flanking Active TSS Primary hematopoietic stem cells blood
31 chr15:44118600-44119600 Active TSS Brain Hippocampus Middle brain
32 chr15:44118600-44119600 Active TSS Placenta Amnion Placenta Amnion
33 chr15:44118600-44119600 Active TSS HepG2 liver
34 chr15:44118600-44119800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr15:44118600-44119800 Flanking Active TSS Adipose Nuclei Adipose
36 chr15:44118600-44119800 Flanking Active TSS Stomach Smooth Muscle stomach
37 chr15:44118600-44119800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
38 chr15:44118600-44120000 Active TSS Fetal Brain Female brain
39 chr15:44118600-44120200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr15:44118600-44120200 Flanking Active TSS Fetal Muscle Trunk muscle
41 chr15:44118600-44120200 Active TSS A549 lung
42 chr15:44118600-44120400 Flanking Active TSS Primary T cells fromperipheralblood blood
43 chr15:44118600-44120400 Active TSS Duodenum Smooth Muscle Duodenum
44 chr15:44118600-44120600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr15:44118600-44120600 Flanking Active TSS Muscle Satellite Cultured Cells --
46 chr15:44118600-44120600 Active TSS Thymus Thymus
47 chr15:44118600-44120600 Active TSS HSMM muscle
48 chr15:44118600-44120800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr15:44118600-44121200 Active TSS Brain Germinal Matrix brain
50 chr15:44118800-44119000 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell

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