Variant report

No.	Distal block	Cell Line	Cell type
1	chr16:70619047..70621976-chr16:70630106..70632921,2	MCF-7	breast:
2	chr16:70625540..70627219-chr16:70628655..70630585,2	K562	blood:
3	chr16:70628964..70630955-chr16:70634030..70636203,2	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs16970320	1.00[CEU][hapmap];0.87[CHB][hapmap];0.93[JPT][hapmap];0.88[ASN][1000 genomes]
rs16970459	1.00[CEU][hapmap]
rs2124833	0.98[ASN][1000 genomes]
rs28582709	0.83[ASN][1000 genomes]
rs3886749	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs4082236	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs56789504	0.85[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs57136896	0.85[ASN][1000 genomes]
rs59639975	0.88[ASN][1000 genomes]
rs60432288	0.86[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs60775369	0.85[ASN][1000 genomes]
rs61191728	0.84[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs6499325	0.85[ASN][1000 genomes]
rs7192031	1.00[CEU][hapmap];0.92[JPT][hapmap]
rs7196201	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7197333	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7199331	0.91[ASN][1000 genomes]
rs74026082	0.88[ASN][1000 genomes]
rs74026083	0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs74026085	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs8049598	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8061705	0.85[ASN][1000 genomes]
rs8062231	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs8063029	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs9924014	1.00[CEU][hapmap]
rs9924460	1.00[CEU][hapmap]
rs9924487	0.90[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs8049475	COG4	cis	lymphoblastoid	seeQTL

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:70625600-70630800	Weak transcription	Aorta	Aorta
2	chr16:70625800-70635200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr16:70626200-70644200	Weak transcription	Right Atrium	heart
4	chr16:70626400-70630800	Weak transcription	Fetal Stomach	stomach
5	chr16:70626400-70635800	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr16:70626400-70639000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr16:70626400-70642200	Weak transcription	Esophagus	oesophagus
8	chr16:70626400-70644200	Weak transcription	Lung	lung
9	chr16:70626400-70644200	Weak transcription	Stomach Smooth Muscle	stomach
10	chr16:70627000-70630400	Weak transcription	Fetal Muscle Trunk	muscle
11	chr16:70628400-70632200	Enhancers	Spleen	Spleen
12	chr16:70628600-70632200	Strong transcription	Fetal Intestine Small	intestine
13	chr16:70628800-70632200	Weak transcription	Fetal Intestine Large	intestine
14	chr16:70629600-70644000	Weak transcription	Fetal Muscle Leg	muscle
15	chr16:70630200-70630400	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr16:70630200-70634200	Genic enhancers	Breast Myoepithelial Primary Cells	Breast

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