Variant report

Variant	rs8063029
Chromosome Location	chr16:70627228-70627229
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs16970320	1.00[CEU][hapmap];0.87[CHB][hapmap];0.93[JPT][hapmap];0.87[ASN][1000 genomes]
rs16970459	1.00[CEU][hapmap]
rs2124833	0.95[ASN][1000 genomes]
rs28582709	0.80[ASN][1000 genomes]
rs3886749	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4082236	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs56789504	0.85[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs57136896	0.82[ASN][1000 genomes]
rs59639975	0.86[ASN][1000 genomes]
rs60432288	0.86[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs60775369	0.83[ASN][1000 genomes]
rs61191728	0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs6499325	0.82[ASN][1000 genomes]
rs7192031	1.00[CEU][hapmap];0.92[JPT][hapmap]
rs7196201	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs7197333	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs7199331	0.90[ASN][1000 genomes]
rs74026082	0.87[ASN][1000 genomes]
rs74026083	0.86[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs74026085	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs8049475	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs8049598	0.94[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs8061705	0.82[ASN][1000 genomes]
rs8062231	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9924014	1.00[CEU][hapmap]
rs9924460	1.00[CEU][hapmap]
rs9924487	0.87[ASN][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:70609000-70628000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr16:70624800-70627600	Weak transcription	NHEK	skin
3	chr16:70624800-70628600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr16:70625200-70628600	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr16:70625200-70628800	Enhancers	Fetal Intestine Large	intestine
6	chr16:70625400-70628200	Weak transcription	Duodenum Smooth Muscle	Duodenum
7	chr16:70625600-70630800	Weak transcription	Aorta	Aorta
8	chr16:70625800-70635200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr16:70626200-70628400	Weak transcription	Spleen	Spleen
10	chr16:70626200-70628600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr16:70626200-70644200	Weak transcription	Right Atrium	heart
12	chr16:70626400-70628400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr16:70626400-70628600	Weak transcription	Adipose Nuclei	Adipose
14	chr16:70626400-70628600	Weak transcription	Osteobl	bone
15	chr16:70626400-70630800	Weak transcription	Fetal Stomach	stomach
16	chr16:70626400-70635800	Weak transcription	Skeletal Muscle Male	skeletal muscle
17	chr16:70626400-70639000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr16:70626400-70642200	Weak transcription	Esophagus	oesophagus
19	chr16:70626400-70644200	Weak transcription	Lung	lung
20	chr16:70626400-70644200	Weak transcription	Stomach Smooth Muscle	stomach
21	chr16:70626600-70628400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
22	chr16:70626800-70627400	Weak transcription	Fetal Intestine Small	intestine
23	chr16:70627000-70630400	Weak transcription	Fetal Muscle Trunk	muscle
24	chr16:70627200-70627600	Weak transcription	Fetal Muscle Leg	muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links