The 2.0 version of rSNPBase

Variant report

Variant rs8050545
Chromosome Location chr16:65027696-65027697
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:64991400-65032600 Weak transcription Rectal Smooth Muscle rectum
2 chr16:65000800-65051000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr16:65003400-65034000 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr16:65014200-65040200 Weak transcription Fetal Intestine Small intestine
5 chr16:65015000-65035000 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr16:65016200-65032400 Weak transcription Lung lung
7 chr16:65016200-65040200 Weak transcription Left Ventricle heart
8 chr16:65017200-65041800 Weak transcription Colon Smooth Muscle Colon
9 chr16:65018000-65035600 Strong transcription HSMM muscle
10 chr16:65018400-65028400 Strong transcription NH-A brain
11 chr16:65018400-65028600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr16:65018800-65035600 Strong transcription Osteobl bone
13 chr16:65019000-65028000 Strong transcription NHDF-Ad bronchial
14 chr16:65019600-65027800 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr16:65020200-65028800 Strong transcription NHLF lung
16 chr16:65021000-65034200 Weak transcription Adipose Nuclei Adipose
17 chr16:65021200-65038200 Weak transcription Brain Germinal Matrix brain
18 chr16:65022000-65041200 Weak transcription Fetal Heart heart
19 chr16:65022200-65037200 Weak transcription Fetal Intestine Large intestine
20 chr16:65022400-65027800 Strong transcription Fetal Muscle Leg muscle
21 chr16:65023400-65043200 Strong transcription Fetal Lung lung
22 chr16:65023600-65030000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr16:65023600-65039600 Weak transcription Placenta Amnion Placenta Amnion
24 chr16:65024400-65035000 Weak transcription Brain Substantia Nigra brain
25 chr16:65024600-65031800 Weak transcription Brain Hippocampus Middle brain
26 chr16:65024800-65028400 Strong transcription HMEC breast
27 chr16:65025200-65030800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr16:65025200-65037200 Weak transcription Spleen Spleen
29 chr16:65025400-65028400 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr16:65025600-65028200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr16:65025600-65029600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr16:65025800-65027800 Strong transcription Ovary ovary
33 chr16:65025800-65033000 Strong transcription Breast Myoepithelial Primary Cells Breast
34 chr16:65025800-65051400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr16:65026000-65030000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr16:65026000-65030000 Weak transcription Fetal Stomach stomach
37 chr16:65026000-65030600 Weak transcription Fetal Muscle Trunk muscle
38 chr16:65026000-65032400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr16:65026000-65035800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr16:65026000-65037800 Weak transcription Aorta Aorta
41 chr16:65026000-65038600 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr16:65026200-65033600 Weak transcription Placenta Placenta
43 chr16:65026200-65035200 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr16:65026200-65035200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr16:65026600-65028200 Weak transcription Brain Cingulate Gyrus brain
46 chr16:65026600-65035200 Weak transcription Brain Angular Gyrus brain
47 chr16:65026800-65027800 Weak transcription Fetal Kidney kidney
48 chr16:65026800-65030400 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr16:65026800-65030600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr16:65026800-65030800 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015