Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10853676	0.83[AMR][1000 genomes]
rs11083216	0.93[ASN][1000 genomes]
rs11083218	0.90[ASN][1000 genomes]
rs11875594	0.82[AMR][1000 genomes]
rs12455678	0.93[ASN][1000 genomes]
rs12456956	0.97[ASN][1000 genomes]
rs16943751	0.92[ASN][1000 genomes]
rs16943820	0.94[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs16943845	0.98[ASN][1000 genomes]
rs16943868	0.84[AFR][1000 genomes]
rs2287295	0.94[ASN][1000 genomes]
rs62080906	0.92[ASN][1000 genomes]
rs62080907	0.91[ASN][1000 genomes]
rs62080908	0.91[ASN][1000 genomes]
rs62080909	0.91[ASN][1000 genomes]
rs62080910	0.91[ASN][1000 genomes]
rs7231167	0.90[ASN][1000 genomes]
rs8087249	0.93[ASN][1000 genomes]
rs8088013	0.93[ASN][1000 genomes]
rs8088837	0.84[ASN][1000 genomes]
rs8092173	0.91[ASN][1000 genomes]
rs8092333	0.93[ASN][1000 genomes]
rs9956311	0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761996	chr18:24866083-25818618	Flanking Active TSS Enhancers Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs8099800	ANKRD29	cis	parietal	SCAN

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:25199600-25202400	Enhancers	Liver	Liver
2	chr18:25200400-25202000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr18:25200800-25201600	Enhancers	Adipose Nuclei	Adipose

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