Variant report
| Variant | rs8102539 |
|---|---|
| Chromosome Location | chr19:39515324-39515325 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr19:39481000-39516000 | Weak transcription | Brain Angular Gyrus | brain |
| 2 | chr19:39487200-39518200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 3 | chr19:39496600-39515800 | Weak transcription | Ovary | ovary |
| 4 | chr19:39498400-39516600 | Weak transcription | A549 | lung |
| 5 | chr19:39499400-39516600 | Weak transcription | Brain Anterior Caudate | brain |
| 6 | chr19:39499800-39516800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 7 | chr19:39500000-39515600 | Weak transcription | Brain Substantia Nigra | brain |
| 8 | chr19:39501800-39515800 | Weak transcription | Adipose Nuclei | Adipose |
| 9 | chr19:39502000-39515400 | Weak transcription | Fetal Intestine Small | intestine |
| 10 | chr19:39502200-39515600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 11 | chr19:39502400-39518000 | Weak transcription | Aorta | Aorta |
| 12 | chr19:39503000-39515400 | Weak transcription | Brain Hippocampus Middle | brain |
| 13 | chr19:39503600-39520200 | Weak transcription | Liver | Liver |
| 14 | chr19:39504800-39515800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 15 | chr19:39505200-39515600 | Weak transcription | Esophagus | oesophagus |
| 16 | chr19:39506800-39515600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 17 | chr19:39506800-39517200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 18 | chr19:39507200-39517600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 19 | chr19:39507400-39515600 | Weak transcription | Fetal Stomach | stomach |
| 20 | chr19:39510600-39516800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 21 | chr19:39511200-39517600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 22 | chr19:39512400-39518000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 23 | chr19:39513000-39521600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 24 | chr19:39513000-39521600 | Weak transcription | Right Atrium | heart |
| 25 | chr19:39513200-39517400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 26 | chr19:39513600-39517400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 27 | chr19:39514000-39515800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 28 | chr19:39514000-39516200 | Enhancers | K562 | blood |
| 29 | chr19:39514000-39517600 | Weak transcription | NHEK | skin |
| 30 | chr19:39514000-39521400 | Weak transcription | Pancreas | Pancrea |
| 31 | chr19:39514000-39522200 | Weak transcription | Gastric | stomach |
| 32 | chr19:39514200-39517800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 33 | chr19:39514200-39517800 | Weak transcription | Placenta | Placenta |
| 34 | chr19:39514400-39517400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 35 | chr19:39514400-39517400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 36 | chr19:39514400-39517800 | Weak transcription | Brain Germinal Matrix | brain |
| 37 | chr19:39514400-39517800 | Weak transcription | Left Ventricle | heart |
| 38 | chr19:39514400-39520400 | Weak transcription | Fetal Intestine Large | intestine |
| 39 | chr19:39514400-39521600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 40 | chr19:39514400-39521800 | Weak transcription | Colon Smooth Muscle | Colon |
| 41 | chr19:39514600-39517600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 42 | chr19:39514600-39517600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 43 | chr19:39514600-39521400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 44 | chr19:39514800-39517600 | Weak transcription | Lung | lung |
| 45 | chr19:39514800-39518600 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 46 | chr19:39514800-39519600 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 47 | chr19:39514800-39520000 | Strong transcription | Brain Cingulate Gyrus | brain |
| 48 | chr19:39515000-39517200 | Enhancers | GM12878-XiMat | blood |
| 49 | chr19:39515000-39518000 | Strong transcription | Stomach Smooth Muscle | stomach |
| 50 | chr19:39515200-39521600 | Weak transcription | Rectal Smooth Muscle | rectum |
