Variant report

Variant rs55773274
Chromosome Location chr19:39479722-39479723
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:39478800-39480800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr19:39479000-39483200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr19:39479400-39479800 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
4 chr19:39479400-39479800 Enhancers Fetal Muscle Trunk muscle
5 chr19:39479400-39480000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
6 chr19:39479400-39480000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
7 chr19:39479400-39480200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr19:39479400-39480800 Enhancers HepG2 liver
9 chr19:39479400-39481000 Enhancers Fetal Heart heart
10 chr19:39479600-39479800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr19:39479600-39479800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr19:39479600-39480000 Enhancers ES-I3 Cell Line embryonic stem cell
13 chr19:39479600-39480000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr19:39479600-39480000 Enhancers HUES48 Cell Line embryonic stem cell
15 chr19:39479600-39480000 Enhancers iPS-18 Cell Line embryonic stem cell
16 chr19:39479600-39480000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr19:39479600-39480000 Enhancers Breast Myoepithelial Primary Cells Breast
18 chr19:39479600-39480000 Enhancers Lung lung
19 chr19:39479600-39480000 Flanking Active TSS A549 lung
20 chr19:39479600-39480000 Flanking Active TSS HSMMtube muscle
21 chr19:39479600-39480000 Enhancers NH-A brain
22 chr19:39479600-39480200 Enhancers H1 Cell Line embryonic stem cell
23 chr19:39479600-39480200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr19:39479600-39480200 Enhancers HUES6 Cell Line embryonic stem cell
25 chr19:39479600-39480200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
26 chr19:39479600-39480200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr19:39479600-39480200 Bivalent Enhancer Muscle Satellite Cultured Cells --
28 chr19:39479600-39480200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
29 chr19:39479600-39480200 Enhancers Adipose Nuclei Adipose
30 chr19:39479600-39480200 Enhancers Fetal Lung lung
31 chr19:39479600-39480200 Enhancers Fetal Stomach stomach
32 chr19:39479600-39480200 Enhancers Placenta Amnion Placenta Amnion
33 chr19:39479600-39480200 Enhancers Hela-S3 cervix
34 chr19:39479600-39480200 Enhancers HMEC breast
35 chr19:39479600-39480200 Enhancers NHDF-Ad bronchial
36 chr19:39479600-39481000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr19:39479600-39481000 Enhancers Fetal Muscle Leg muscle
38 chr19:39479600-39482800 Enhancers Placenta Placenta

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