Variant report

Variant rs8103072
Chromosome Location chr19:52804122-52804123
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52801200-52813200 ZNF genes & repeats A549 lung
2 chr19:52801600-52804200 Weak transcription Brain Angular Gyrus brain
3 chr19:52801600-52806000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
4 chr19:52801600-52808800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr19:52801800-52804800 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
6 chr19:52801800-52805600 ZNF genes & repeats Fetal Intestine Small intestine
7 chr19:52801800-52827200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr19:52801800-52829200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr19:52802000-52804200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr19:52802000-52804400 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr19:52802000-52804600 ZNF genes & repeats K562 blood
12 chr19:52802000-52806400 ZNF genes & repeats Thymus Thymus
13 chr19:52802000-52806800 ZNF genes & repeats GM12878-XiMat blood
14 chr19:52802000-52808800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr19:52802000-52813200 ZNF genes & repeats Primary B cells from cord blood blood
16 chr19:52802000-52826400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr19:52802000-52830000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr19:52802200-52804200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr19:52802200-52804600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
20 chr19:52802200-52805400 Strong transcription Fetal Muscle Trunk muscle
21 chr19:52802200-52805800 Strong transcription Fetal Lung lung
22 chr19:52802200-52806000 Strong transcription Fetal Stomach stomach
23 chr19:52802200-52806200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
24 chr19:52802200-52806200 ZNF genes & repeats Primary hematopoietic stem cells blood
25 chr19:52802200-52808800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr19:52802200-52809000 Strong transcription Primary T cells fromperipheralblood blood
27 chr19:52802200-52813000 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
28 chr19:52802200-52827400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
29 chr19:52802200-52828400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr19:52802200-52829200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
31 chr19:52802400-52804200 Strong transcription Rectal Mucosa Donor 31 rectum
32 chr19:52802400-52804400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr19:52802400-52804400 Strong transcription Fetal Muscle Leg muscle
34 chr19:52802400-52804400 ZNF genes & repeats Fetal Thymus thymus
35 chr19:52802400-52805400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr19:52802400-52805400 Strong transcription Left Ventricle heart
37 chr19:52802400-52805400 Strong transcription Skeletal Muscle Female skeletal muscle
38 chr19:52802400-52805400 ZNF genes & repeats NHEK skin
39 chr19:52802400-52806200 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr19:52802400-52806200 Strong transcription H9 Cell Line embryonic stem cell
41 chr19:52802400-52806800 Strong transcription iPS-18 Cell Line embryonic stem cell
42 chr19:52802400-52807400 ZNF genes & repeats Duodenum Mucosa Duodenum
43 chr19:52802400-52808600 ZNF genes & repeats Primary T cells from cord blood blood
44 chr19:52802400-52808800 Strong transcription Skeletal Muscle Male skeletal muscle
45 chr19:52802400-52814000 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
46 chr19:52802400-52828800 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
47 chr19:52802400-52841800 ZNF genes & repeats Liver Liver
48 chr19:52802600-52805400 Strong transcription Primary T killer memory cells from peripheral blood blood
49 chr19:52802600-52806200 ZNF genes & repeats Esophagus oesophagus
50 chr19:52802600-52806400 Strong transcription Fetal Adrenal Gland Adrenal Gland

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