Variant report

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	22:32920308-32927723..22:33154607-33167707	H1-hESC	embryonic stem cell:	embryo
2	22:32578360-32590642..22:33154607-33167707	K562	blood:
3	22:32342898-32343477..22:33154607-33167707	Hela-S3	cervix:
4	22:32764253-32784733..22:33154607-33167707	K562	blood:
5	22:32053085-32061138..22:33154607-33167707	K562	blood:
6	22:33154607-33167707..22:33262063-33266567	Hela-S3	cervix:
7	22:33154607-33167707..22:33339333-33353583	Hela-S3	cervix:
8	22:32292186-32294405..22:33154607-33167707	K562	blood:
9	22:32594665-32606395..22:33154607-33167707	H1-hESC	embryonic stem cell:	embryo

No data

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs16991152	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs16991252	1.00[EUR][1000 genomes]
rs16991318	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs57213553	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs58338477	1.00[EUR][1000 genomes]
rs58394026	1.00[EUR][1000 genomes]
rs5998641	1.00[EUR][1000 genomes]
rs5998642	1.00[EUR][1000 genomes]
rs61586836	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7288955	1.00[EUR][1000 genomes]
rs73881789	0.95[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73881802	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73881904	1.00[EUR][1000 genomes]
rs73881908	1.00[EUR][1000 genomes]
rs73881909	1.00[EUR][1000 genomes]
rs73885105	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73885108	1.00[EUR][1000 genomes]
rs73885112	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73885113	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73885114	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73885120	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73885121	1.00[EUR][1000 genomes]
rs73885123	1.00[EUR][1000 genomes]
rs8141493	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs8142191	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1061384	chr22:33165464-33191811	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:33151000-33175400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr22:33158400-33171800	Weak transcription	HepG2	liver
3	chr22:33161400-33167800	Weak transcription	Right Atrium	heart
4	chr22:33161800-33168800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr22:33165800-33169800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr22:33166200-33167800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr22:33166600-33169200	Enhancers	Thymus	Thymus
8	chr22:33167200-33169200	Enhancers	Dnd41	blood
9	chr22:33167200-33169400	Enhancers	Fetal Thymus	thymus
10	chr22:33167400-33169800	Enhancers	Fetal Muscle Leg	muscle
11	chr22:33167600-33168000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr22:33167600-33168400	Enhancers	HSMMtube	muscle

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