Variant report
| Variant | rs8142545 |
|---|---|
| Chromosome Location | chr22:29493470-29493471 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr22:29475600-29505600 | Weak transcription | Spleen | Spleen |
| 2 | chr22:29476800-29494800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 3 | chr22:29478800-29498200 | Weak transcription | Brain Germinal Matrix | brain |
| 4 | chr22:29480600-29498000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 5 | chr22:29483400-29550200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 6 | chr22:29486600-29494800 | Weak transcription | NHEK | skin |
| 7 | chr22:29486600-29519000 | Weak transcription | Fetal Brain Male | brain |
| 8 | chr22:29488400-29521200 | Weak transcription | Lung | lung |
| 9 | chr22:29488600-29494800 | Weak transcription | Placenta | Placenta |
| 10 | chr22:29489000-29494800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 11 | chr22:29489200-29494800 | Weak transcription | Adipose Nuclei | Adipose |
| 12 | chr22:29489600-29499800 | Strong transcription | Dnd41 | blood |
| 13 | chr22:29490000-29501600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 14 | chr22:29490000-29505200 | Weak transcription | Aorta | Aorta |
| 15 | chr22:29490000-29514000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 16 | chr22:29490200-29502800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 17 | chr22:29490200-29503600 | Weak transcription | HMEC | breast |
| 18 | chr22:29490400-29499000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 19 | chr22:29490400-29501400 | Weak transcription | Colon Smooth Muscle | Colon |
| 20 | chr22:29490400-29508000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 21 | chr22:29490400-29539800 | Weak transcription | Psoas Muscle | Psoas |
| 22 | chr22:29490600-29495000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 23 | chr22:29491200-29521200 | Weak transcription | Colonic Mucosa | Colon |
| 24 | chr22:29491600-29495000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 25 | chr22:29491600-29522200 | Weak transcription | Liver | Liver |
| 26 | chr22:29491800-29494600 | Weak transcription | Fetal Brain Female | brain |
| 27 | chr22:29491800-29494800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 28 | chr22:29491800-29503600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 29 | chr22:29491800-29504400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 30 | chr22:29491800-29505400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 31 | chr22:29492000-29494400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 32 | chr22:29492000-29494400 | Weak transcription | Fetal Thymus | thymus |
| 33 | chr22:29492000-29501000 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 34 | chr22:29492000-29503800 | Weak transcription | NHDF-Ad | bronchial |
| 35 | chr22:29492200-29493600 | Enhancers | Brain Substantia Nigra | brain |
| 36 | chr22:29492200-29493800 | Enhancers | Fetal Heart | heart |
| 37 | chr22:29492200-29494600 | Enhancers | Left Ventricle | heart |
| 38 | chr22:29492400-29493600 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 39 | chr22:29492400-29493600 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 40 | chr22:29492400-29493600 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 41 | chr22:29492400-29493600 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 42 | chr22:29492400-29493600 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 43 | chr22:29492400-29493600 | Enhancers | Fetal Kidney | kidney |
| 44 | chr22:29492400-29493800 | Enhancers | H1 Cell Line | embryonic stem cell |
| 45 | chr22:29492400-29494000 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 46 | chr22:29492400-29494800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 47 | chr22:29492400-29495000 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 48 | chr22:29492600-29493600 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 49 | chr22:29492600-29493600 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 50 | chr22:29492600-29493600 | Enhancers | HUES64 Cell Line | embryonic stem cell |
