Variant report

Variant	rs8193034
Chromosome Location	chr14:24720198-24720199
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:24717325..24723149-chr14:24733278..24737314,6	K562	blood:
2	chr14:24719690..24722490-chr14:24911291..24913138,2	MCF-7	breast:
3	chr14:24708910..24714808-chr14:24716113..24720760,9	K562	blood:
4	chr14:24682539..24684656-chr14:24718322..24720950,2	K562	blood:
5	chr14:24717972..24720796-chr14:24724956..24726593,2	K562	blood:
6	chr14:24710456..24715181-chr14:24717112..24722262,8	K562	blood:
7	chr14:24656273..24659288-chr14:24719775..24722749,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000092295	Chromatin interaction
ENSG00000100445	Chromatin interaction
ENSG00000196497	Chromatin interaction
ENSG00000092330	Chromatin interaction
ENSG00000100949	Chromatin interaction
ENSG00000254692	Chromatin interaction
ENSG00000254505	Chromatin interaction

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs11625433	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12050103	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2273303	1.00[EUR][1000 genomes]
rs2277486	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3783442	1.00[EUR][1000 genomes]
rs41294732	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:90 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:24712200-24723200	Weak transcription	Gastric	stomach
2	chr14:24712200-24724200	Weak transcription	Ovary	ovary
3	chr14:24712600-24720600	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr14:24712600-24727600	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr14:24712600-24740000	Weak transcription	Small Intestine	intestine
6	chr14:24712800-24721000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr14:24712800-24723800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr14:24713000-24722000	Weak transcription	Fetal Brain Female	brain
9	chr14:24713000-24723000	Weak transcription	Brain Angular Gyrus	brain
10	chr14:24713000-24723200	Weak transcription	Fetal Muscle Trunk	muscle
11	chr14:24713000-24723400	Weak transcription	Brain Cingulate Gyrus	brain
12	chr14:24713000-24723400	Weak transcription	Pancreas	Pancrea
13	chr14:24713000-24734200	Weak transcription	Left Ventricle	heart
14	chr14:24713000-24740000	Weak transcription	Right Atrium	heart
15	chr14:24713200-24720600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr14:24713200-24720600	Weak transcription	Brain Inferior Temporal Lobe	brain
17	chr14:24713200-24720800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr14:24713200-24720800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr14:24713200-24721000	Weak transcription	Brain Hippocampus Middle	brain
20	chr14:24713200-24721000	Weak transcription	HMEC	breast
21	chr14:24713200-24721000	Weak transcription	NHEK	skin
22	chr14:24713200-24721200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr14:24713200-24721400	Weak transcription	Brain Anterior Caudate	brain
24	chr14:24713200-24722000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
25	chr14:24713200-24723000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
26	chr14:24713200-24723200	Weak transcription	Skeletal Muscle Female	skeletal muscle
27	chr14:24713200-24723200	Weak transcription	Thymus	Thymus
28	chr14:24713200-24723400	Weak transcription	Skeletal Muscle Male	skeletal muscle
29	chr14:24713200-24723800	Weak transcription	Aorta	Aorta
30	chr14:24713200-24723800	Weak transcription	Colonic Mucosa	Colon
31	chr14:24713200-24723800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
32	chr14:24713200-24723800	Weak transcription	Right Ventricle	heart
33	chr14:24713200-24724200	Weak transcription	Adipose Nuclei	Adipose
34	chr14:24713200-24725600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
35	chr14:24713200-24727800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
36	chr14:24713200-24727800	Weak transcription	Hela-S3	cervix
37	chr14:24713200-24728000	Weak transcription	Stomach Smooth Muscle	stomach
38	chr14:24713200-24728200	Weak transcription	Muscle Satellite Cultured Cells	--
39	chr14:24713200-24728200	Weak transcription	Fetal Muscle Leg	muscle
40	chr14:24713200-24728200	Weak transcription	NHLF	lung
41	chr14:24713200-24732600	Weak transcription	Fetal Thymus	thymus
42	chr14:24713200-24734400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
43	chr14:24713200-24734600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
44	chr14:24713200-24734600	Weak transcription	Cortex derived primary cultured neurospheres	brain
45	chr14:24713200-24734600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
46	chr14:24713200-24734800	Weak transcription	H9 Cell Line	embryonic stem cell
47	chr14:24713200-24734800	Weak transcription	Duodenum Smooth Muscle	Duodenum
48	chr14:24713200-24735400	Weak transcription	Rectal Smooth Muscle	rectum
49	chr14:24713400-24723400	Weak transcription	Primary neutrophils fromperipheralblood	blood
50	chr14:24713400-24726000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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