Variant report

No.	Distal block	Cell Line	Cell type
1	chr5:40862902..40865200-chr5:40878368..40881036,2	K562	blood:
2	chr5:40861136..40863091-chr5:40865638..40868114,2	K562	blood:
3	chr5:40853807..40855420-chr5:40862463..40864172,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RPL37-1	chr5:40861163-40863498	ucscGeneNc_uc003jmd_1

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10067114	0.82[ASN][1000 genomes]
rs10071209	0.81[ASN][1000 genomes]
rs10472345	0.80[ASN][1000 genomes]
rs1376178	0.82[ASN][1000 genomes]
rs1697938	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2122569	0.81[ASN][1000 genomes]
rs2443035	0.82[ASN][1000 genomes]
rs2443040	0.81[ASN][1000 genomes]
rs2459465	0.81[ASN][1000 genomes]
rs2459467	0.81[ASN][1000 genomes]
rs2597746	0.82[ASN][1000 genomes]
rs323565	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs324063	0.82[ASN][1000 genomes]
rs324066	0.82[ASN][1000 genomes]
rs324067	0.81[ASN][1000 genomes]
rs324068	0.81[ASN][1000 genomes]
rs364443	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs420220	0.87[ASN][1000 genomes]
rs438652	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs441073	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6861054	0.85[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs6887212	0.87[ASN][1000 genomes]
rs837388	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv880438	chr5:40753877-40900717	Strong transcription Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	160 gene(s)	inside rSNPs	diseases
2	esv3444044	chr5:40860244-40888483	Enhancers ZNF genes & repeats Weak transcription Active TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:40852800-40865200	Weak transcription	Pancreas	Pancrea
2	chr5:40856200-40871400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr5:40858600-40863200	Weak transcription	Right Atrium	heart

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