Variant report

Variant	rs842587
Chromosome Location	chr2:184275772-184275773
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs1098912	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1098919	0.94[AFR][1000 genomes]
rs1098920	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1663648	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2091739	1.00[EUR][1000 genomes]
rs2103379	1.00[EUR][1000 genomes]
rs2118474	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2164852	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56395447	1.00[EUR][1000 genomes]
rs57756154	1.00[EUR][1000 genomes]
rs57962549	1.00[EUR][1000 genomes]
rs58831964	0.83[AFR][1000 genomes]
rs59225772	1.00[EUR][1000 genomes]
rs59781911	1.00[EUR][1000 genomes]
rs59897746	1.00[EUR][1000 genomes]
rs73040580	1.00[EUR][1000 genomes]
rs73042641	1.00[EUR][1000 genomes]
rs73042643	1.00[EUR][1000 genomes]
rs842540	0.94[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs842547	0.96[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs842550	0.96[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs842557	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs842558	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs842559	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs842560	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs842562	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs842565	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs842570	1.00[EUR][1000 genomes]
rs842571	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs842574	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs842575	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs842576	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs842577	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs842582	0.96[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs842588	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs842589	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs842592	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs842593	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs842594	0.86[AFR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:184274200-184281600	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr2:184275000-184275800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr2:184275000-184276000	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
4	chr2:184275400-184275800	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
5	chr2:184275600-184281400	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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