Variant report

Variant	rs851660
Chromosome Location	chr7:147513872-147513873
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs1101042	1.00[AFR][1000 genomes]
rs1404739	0.83[AFR][1000 genomes]
rs1404740	0.83[AFR][1000 genomes]
rs1880572	0.83[AFR][1000 genomes]
rs2538980	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs2708254	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs2708260	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs2708272	1.00[YRI][hapmap]
rs2710142	0.83[YRI][hapmap]
rs6976194	0.83[AFR][1000 genomes]
rs851664	1.00[AFR][1000 genomes]
rs851665	1.00[AFR][1000 genomes]
rs851671	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs851675	1.00[AFR][1000 genomes]
rs851677	1.00[AFR][1000 genomes]
rs851680	1.00[AFR][1000 genomes]
rs851682	1.00[AFR][1000 genomes]
rs851687	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933973	chr7:147438206-147549993	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	n/a
2	nsv889397	chr7:147471710-147585819	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	n/a
3	nsv465193	chr7:147512619-147583680	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	n/a
4	nsv608965	chr7:147512619-147583680	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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