Variant report

Variant	rs871024
Chromosome Location	chr9:21803880-21803881
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:21803351..21805632-chr9:22007857..22009751,2	MCF-7	breast:
2	chr9:21802179..21803949-chr9:21994356..21995893,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000266446	Chromatin interaction
ENSG00000147883	Chromatin interaction
ENSG00000240498	Chromatin interaction
ENSG00000147889	Chromatin interaction

Extended variants
information (count: 167 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:164)

rs_ID	r²[population]
rs10118262	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10119658	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10738595	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10738597	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10738599	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10757238	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10757239	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10757240	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10757241	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10757242	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10757243	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10757245	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10757246	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10757247	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10757250	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10757251	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10757252	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10757253	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10757254	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10757255	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10811600	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10811601	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10811602	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10811604	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10811605	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10811613	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10811615	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10811617	0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10811618	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10965122	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10965127	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12344842	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1335502	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1335505	0.85[CEU][hapmap];0.89[CHB][hapmap];0.85[JPT][hapmap];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1335506	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1335507	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1335508	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1335512	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1345022	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1345025	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1345027	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1372057	0.85[CEU][hapmap];0.89[CHB][hapmap];0.85[JPT][hapmap];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1372058	0.85[CEU][hapmap];0.89[CHB][hapmap];0.85[JPT][hapmap];0.82[YRI][hapmap];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1372059	0.85[CEU][hapmap];0.89[CHB][hapmap];0.85[JPT][hapmap];0.82[YRI][hapmap];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1414228	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1414229	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1414236	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1414237	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1414238	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1414240	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1414241	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1414242	0.84[ASW][hapmap];0.89[CHB][hapmap];0.85[JPT][hapmap];0.95[MEX][hapmap];0.84[TSI][hapmap];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1414244	0.85[CEU][hapmap];0.89[CHB][hapmap];0.85[JPT][hapmap];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1414245	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1414246	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1414247	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1414248	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1414249	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1414250	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1414251	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1414252	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1414256	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1414257	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1440993	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1542074	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1542075	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1542076	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1556696	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1556697	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1561651	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1561652	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs17833407	0.83[CHB][hapmap]
rs1889680	0.81[JPT][hapmap]
rs1932237	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1965153	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2027162	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2027163	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2043991	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2119466	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2119467	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2123338	0.81[JPT][hapmap]
rs2152272	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2152273	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2165408	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap]
rs2165411	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2184551	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2218220	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2891159	0.85[CEU][hapmap];0.89[CHB][hapmap];0.85[JPT][hapmap];0.89[TSI][hapmap];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2891160	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3849929	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3927737	0.89[CEU][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs3927738	0.82[AFR][1000 genomes]
rs3928894	1.00[ASW][hapmap];1.00[CHB][hapmap];0.83[CHD][hapmap];0.95[JPT][hapmap];0.89[LWK][hapmap];0.91[MEX][hapmap];0.90[MKK][hapmap];0.82[TSI][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4300088	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4350062	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4352937	0.85[CEU][hapmap];0.89[CHB][hapmap];0.85[JPT][hapmap];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4364717	1.00[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.81[TSI][hapmap];0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs4384075	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4431674	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4548267	0.85[CEU][hapmap];0.88[CHB][hapmap];0.85[JPT][hapmap];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4636294	0.84[ASW][hapmap];0.85[CEU][hapmap];0.83[CHB][hapmap];0.95[MEX][hapmap];0.89[TSI][hapmap];0.91[AMR][1000 genomes];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6475564	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6475566	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6475568	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6475569	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6475571	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6475572	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6475574	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6475576	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6475578	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6475579	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6475585	1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7018772	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7019601	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7021012	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7021538	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7022856	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7023299	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7023474	1.00[ASW][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];0.95[JPT][hapmap];0.89[LWK][hapmap];0.91[MEX][hapmap];0.90[MKK][hapmap];0.87[TSI][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7023680	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7024027	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7027989	1.00[ASW][hapmap];0.85[CEU][hapmap];0.89[LWK][hapmap];0.95[MEX][hapmap];0.90[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7028913	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7029040	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7029166	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7029274	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7033503	0.96[CEU][hapmap];0.94[CHB][hapmap];0.95[JPT][hapmap];0.90[YRI][hapmap];0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7036249	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7036257	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7037577	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7038708	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7043827	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7045768	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72691561	0.92[AFR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72691562	0.92[AFR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72691563	0.92[AFR][1000 genomes];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72691564	0.92[AFR][1000 genomes];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7846749	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7850446	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7852450	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7852710	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7852900	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7853131	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7854018	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7854222	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7855242	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7856941	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7858991	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7866540	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7866787	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7866885	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7871345	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7874319	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs869329	0.92[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs869330	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.89[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9298823	0.85[CEU][hapmap];0.89[CHB][hapmap];0.85[JPT][hapmap];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9298824	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9298825	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs935053	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs935055	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs950770	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9644821	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9644858	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9886831	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529609	chr9:21708371-22537069	Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
2	nsv1026981	chr9:21748202-21811697	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	16 gene(s)	inside rSNPs	diseases
3	nsv8426	chr9:21763810-22176200	Weak transcription Strong transcription Active TSS Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs871024	MTAP	cis	parietal	SCAN

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:21801400-21804200	Active TSS	ES-I3 Cell Line	embryonic stem cell
2	chr9:21801400-21804400	Active TSS	H1 Cell Line	embryonic stem cell
3	chr9:21801400-21804400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr9:21801400-21804400	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr9:21801600-21804000	Active TSS	H9 Cell Line	embryonic stem cell
6	chr9:21801600-21804000	Active TSS	HUES64 Cell Line	embryonic stem cell
7	chr9:21801600-21804000	Flanking Active TSS	Primary hematopoietic stem cells	blood
8	chr9:21801600-21804000	Active TSS	Ovary	ovary
9	chr9:21801600-21804000	Active TSS	Psoas Muscle	Psoas
10	chr9:21801600-21804200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr9:21801600-21804200	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr9:21801600-21804200	Active TSS	Right Atrium	heart
13	chr9:21801600-21804400	Active TSS	HUES48 Cell Line	embryonic stem cell
14	chr9:21801600-21804600	Active TSS	HSMMtube	muscle
15	chr9:21801600-21805000	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr9:21801600-21805000	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr9:21801800-21804000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
18	chr9:21801800-21804000	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr9:21801800-21804000	Active TSS	iPS-15b Cell Line	embryonic stem cell
20	chr9:21801800-21804000	Active TSS	iPS-18 Cell Line	embryonic stem cell
21	chr9:21801800-21804000	Active TSS	Breast Myoepithelial Primary Cells	Breast
22	chr9:21801800-21804000	Active TSS	Right Ventricle	heart
23	chr9:21801800-21804000	Active TSS	Stomach Mucosa	stomach
24	chr9:21801800-21804000	Active TSS	NHDF-Ad	bronchial
25	chr9:21801800-21804200	Active TSS	HUES6 Cell Line	embryonic stem cell
26	chr9:21801800-21804200	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr9:21801800-21804200	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr9:21801800-21804200	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr9:21801800-21804200	Active TSS	Thymus	Thymus
30	chr9:21801800-21804400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
31	chr9:21801800-21804400	Active TSS	iPS-20b Cell Line	embryonic stem cell
32	chr9:21801800-21804400	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
33	chr9:21802000-21804000	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
34	chr9:21802000-21804000	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
35	chr9:21802000-21804000	Active TSS	Brain Hippocampus Middle	brain
36	chr9:21802000-21804000	Active TSS	Colonic Mucosa	Colon
37	chr9:21802000-21804000	Active TSS	Hela-S3	cervix
38	chr9:21802000-21804000	Active TSS	HSMM	muscle
39	chr9:21802000-21804000	Active TSS	NHEK	skin
40	chr9:21802000-21804200	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
41	chr9:21802000-21804200	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
42	chr9:21802000-21804200	Active TSS	Fetal Intestine Small	intestine
43	chr9:21802000-21804200	Active TSS	GM12878-XiMat	blood
44	chr9:21802000-21804200	Active TSS	HMEC	breast
45	chr9:21802000-21804400	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
46	chr9:21802000-21804400	Active TSS	NHLF	lung
47	chr9:21802200-21804000	Active TSS	Fetal Brain Male	brain
48	chr9:21802200-21804200	Active TSS	HepG2	liver
49	chr9:21802200-21804400	Active TSS	Rectal Mucosa Donor 29	rectum
50	chr9:21802800-21804200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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