Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs12743126	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12743133	0.97[ASN][1000 genomes]
rs1557562	0.97[ASN][1000 genomes]
rs16848423	1.00[ASN][1000 genomes]
rs34370670	0.82[ASN][1000 genomes]
rs34605676	0.97[ASN][1000 genomes]
rs34725056	1.00[ASN][1000 genomes]
rs35294987	0.95[ASN][1000 genomes]
rs35357711	1.00[ASN][1000 genomes]
rs35502462	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35764701	0.97[ASN][1000 genomes]
rs36037377	1.00[ASN][1000 genomes]
rs36139619	0.92[ASN][1000 genomes]
rs57442025	1.00[ASN][1000 genomes]
rs57443533	1.00[ASN][1000 genomes]
rs66584940	1.00[ASN][1000 genomes]
rs6683279	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71645249	1.00[ASN][1000 genomes]
rs73042498	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73042500	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs984872	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2764232	chr1:175387997-175504394	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv1792278	chr1:175404515-175429913	Enhancers Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:175417800-175419400	Enhancers	GM12878-XiMat	blood
2	chr1:175418400-175425200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr1:175418600-175421000	Weak transcription	Fetal Brain Male	brain

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