Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:74160251..74162988-chr15:74171471..74174133,2	K562	blood:
2	chr15:74160976..74162721-chr15:74218603..74220495,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000261801	Chromatin interaction
ENSG00000129038	Chromatin interaction

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1031407	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11072447	0.96[ASN][1000 genomes]
rs11632129	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12148568	0.81[AMR][1000 genomes]
rs12909231	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12915472	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1452385	0.82[EUR][1000 genomes]
rs1452386	0.82[EUR][1000 genomes]
rs1452387	0.82[EUR][1000 genomes]
rs1478558	0.82[AMR][1000 genomes]
rs1823718	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1901571	0.86[ASN][1000 genomes]
rs2167649	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2415231	0.80[AMR][1000 genomes]
rs28379895	0.82[EUR][1000 genomes]
rs35814490	0.80[AMR][1000 genomes]
rs4338750	0.82[EUR][1000 genomes]
rs4366671	0.82[EUR][1000 genomes]
rs4457949	0.82[EUR][1000 genomes]
rs4633670	0.82[EUR][1000 genomes]
rs4886646	0.81[AMR][1000 genomes]
rs4886694	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4886698	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62007073	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs71399764	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7181093	0.82[AMR][1000 genomes]
rs896593	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043335	chr15:74078689-74241186	Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:74154800-74167000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr15:74158600-74164600	Enhancers	Right Atrium	heart
3	chr15:74159800-74162600	Weak transcription	Fetal Intestine Small	intestine
4	chr15:74160000-74163400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr15:74160400-74161800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
6	chr15:74161400-74163400	Weak transcription	Ovary	ovary
7	chr15:74161600-74161800	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr15:74161600-74163800	Enhancers	Left Ventricle	heart
9	chr15:74161600-74164600	Enhancers	Right Ventricle	heart

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