Variant report

Variant	rs35814490
Chromosome Location	chr15:74127314-74127315
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs1031407	0.80[ASN][1000 genomes]
rs11072443	0.87[ASN][1000 genomes]
rs11072447	0.80[ASN][1000 genomes]
rs11632129	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12148568	0.84[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs12909231	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12910560	0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs12914845	0.97[ASN][1000 genomes]
rs12915472	0.80[ASN][1000 genomes]
rs1377060	0.87[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1452385	0.86[EUR][1000 genomes]
rs1452386	0.86[EUR][1000 genomes]
rs1452387	0.86[EUR][1000 genomes]
rs1478558	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17188111	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1823718	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1901571	0.83[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs2045930	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2045931	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2198295	1.00[ASN][1000 genomes]
rs2415231	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28379895	0.86[EUR][1000 genomes]
rs34222037	0.85[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs4338750	0.86[EUR][1000 genomes]
rs4366671	0.86[EUR][1000 genomes]
rs4457949	0.86[EUR][1000 genomes]
rs4633670	0.86[EUR][1000 genomes]
rs4886412	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4886418	1.00[ASN][1000 genomes]
rs4886419	1.00[ASN][1000 genomes]
rs4886643	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4886644	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4886645	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4886646	0.89[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4886694	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4886698	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62007073	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6495081	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs71399764	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7181093	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs746653	0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs746654	0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs8023709	1.00[ASN][1000 genomes]
rs896593	0.86[EUR][1000 genomes]
rs896600	0.80[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043335	chr15:74078689-74241186	Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:74122600-74128600	Weak transcription	Spleen	Spleen

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