Variant report

Variant	rs912648
Chromosome Location	chr1:95752385-95752386
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RWDD3-1	chr1:95752179-95753228	XLOC_000307
2	lnc-RWDD3-1	chr1:95752295-95753608	NONHSAT004660
3	lnc-RWDD3-1	chr1:95752295-95752873	NONHSAT004657
4	lnc-RWDD3-1	chr1:95752295-95753708	l_93_chr1:95748251-95753708_brain

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10874912	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10874914	0.83[AMR][1000 genomes]
rs11165366	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11165367	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11165379	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12116466	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12118116	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12135605	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12141215	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12142805	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12565207	0.81[EUR][1000 genomes]
rs12752448	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1548278	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17589093	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2182021	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2893323	0.83[EUR][1000 genomes]
rs34988332	0.82[AMR][1000 genomes]
rs4129611	0.82[AMR][1000 genomes]
rs4359066	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4394708	0.86[EUR][1000 genomes]
rs4604740	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61771812	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66930640	0.82[AMR][1000 genomes]
rs72723875	0.84[AMR][1000 genomes]
rs927703	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:95751800-95754200	Enhancers	HepG2	liver
2	chr1:95752000-95752600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr1:95752000-95752600	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr1:95752000-95752600	Enhancers	A549	lung
5	chr1:95752000-95753400	Enhancers	Stomach Mucosa	stomach
6	chr1:95752200-95752400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr1:95752200-95752400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr1:95752200-95755000	Enhancers	Gastric	stomach

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