Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10874914	0.92[AFR][1000 genomes];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11165366	0.81[EUR][1000 genomes]
rs11165367	0.81[EUR][1000 genomes]
rs11165379	0.80[AFR][1000 genomes];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12116466	0.80[EUR][1000 genomes]
rs12135605	0.83[EUR][1000 genomes]
rs12752448	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1548278	0.81[EUR][1000 genomes]
rs17589093	0.83[EUR][1000 genomes]
rs2182021	0.81[EUR][1000 genomes]
rs34009737	0.84[EUR][1000 genomes]
rs34988332	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4129611	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4359066	0.84[AFR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4408199	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4604740	0.84[AFR][1000 genomes];0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs61771812	0.81[EUR][1000 genomes]
rs66930640	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72723875	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs912648	0.81[EUR][1000 genomes]
rs927703	0.88[AFR][1000 genomes];0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830648	chr1:95760162-95926264	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv1006113	chr1:95768502-96139003	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
3	nsv529002	chr1:95781217-95805002	Flanking Bivalent TSS/Enh Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	TF binding region CpG island lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:95790800-95792000	Enhancers	Fetal Stomach	stomach
2	chr1:95791800-95792000	Enhancers	Brain Inferior Temporal Lobe	brain

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