Variant report

Variant rs9257447
Chromosome Location chr6:28950957-28950958
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:28948200-28951000 Active TSS Brain Inferior Temporal Lobe brain
2 chr6:28948200-28951000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
3 chr6:28948400-28951000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr6:28948400-28951000 Active TSS iPS-15b Cell Line embryonic stem cell
5 chr6:28948400-28951000 Active TSS Brain Hippocampus Middle brain
6 chr6:28948400-28951000 Active TSS Fetal Brain Female brain
7 chr6:28948400-28951000 Active TSS Stomach Smooth Muscle stomach
8 chr6:28948400-28951000 Active TSS HSMMtube muscle
9 chr6:28948400-28951800 Active TSS ES-I3 Cell Line embryonic stem cell
10 chr6:28948600-28951000 Active TSS HUES6 Cell Line embryonic stem cell
11 chr6:28948600-28951000 Active TSS HUES64 Cell Line embryonic stem cell
12 chr6:28948600-28951000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
13 chr6:28948600-28951000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr6:28948600-28951000 Active TSS Duodenum Smooth Muscle Duodenum
15 chr6:28948600-28951000 Active TSS Ovary ovary
16 chr6:28948600-28951600 Active TSS K562 blood
17 chr6:28948600-28954800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
18 chr6:28948800-28951000 Active TSS HUES48 Cell Line embryonic stem cell
19 chr6:28948800-28951000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr6:28948800-28951000 Active TSS Fetal Intestine Small intestine
21 chr6:28948800-28951000 Active TSS Fetal Muscle Trunk muscle
22 chr6:28948800-28951000 Active TSS GM12878-XiMat blood
23 chr6:28948800-28951000 Active TSS NHLF lung
24 chr6:28948800-28951200 Active TSS Breast Myoepithelial Primary Cells Breast
25 chr6:28948800-28951200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
26 chr6:28949000-28951000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr6:28949000-28951000 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr6:28949000-28951000 Active TSS Duodenum Mucosa Duodenum
29 chr6:28949000-28951000 Active TSS Fetal Brain Male brain
30 chr6:28949000-28951600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr6:28949200-28951000 Active TSS Rectal Mucosa Donor 29 rectum
32 chr6:28949200-28951000 Active TSS Thymus Thymus
33 chr6:28950000-28952400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr6:28950000-28952800 Weak transcription Small Intestine intestine
35 chr6:28950000-28953400 Weak transcription Lung lung
36 chr6:28950000-28953600 Weak transcription Spleen Spleen
37 chr6:28950200-28951000 Flanking Active TSS Primary hematopoietic stem cells blood
38 chr6:28950200-28951000 Flanking Active TSS Adipose Nuclei Adipose
39 chr6:28950200-28951000 Flanking Active TSS HMEC breast
40 chr6:28950200-28951200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr6:28950200-28951200 Flanking Active TSS Dnd41 blood
42 chr6:28950400-28951000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
43 chr6:28950400-28951000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr6:28950400-28951400 Active TSS HepG2 liver
45 chr6:28950400-28953400 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr6:28950600-28951000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr6:28950600-28951000 Enhancers Primary monocytes fromperipheralblood blood
48 chr6:28950600-28951000 Flanking Active TSS Primary T cells from cord blood blood
49 chr6:28950600-28951000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
50 chr6:28950600-28951000 Enhancers Primary T helper memory cells from peripheral blood 2 blood

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