Variant report

Variant	rs6914955
Chromosome Location	chr6:28908612-28908613
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:151)
CpG islands
(count:122)
Chromatin interactive
region (count:17)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:151 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAFF	chr6:28908470-28909669	HepG2	liver:	n/a	n/a
2	CEBPB	chr6:28908297-28909658	K562	blood:	n/a	n/a
3	ETS1	chr6:28908607-28909142	K562	blood:	n/a	n/a
4	MAX	chr6:28907738-28909821	HCT-116	colon:	n/a	n/a
5	NFIC	chr6:28908548-28909790	GM12878	blood:	n/a	n/a
6	SIN3AK20	chr6:28908332-28908971	PANC-1	pancreas:	n/a	n/a
7	UBTF	chr6:28908347-28909641	K562	blood:	n/a	n/a
8	EP300	chr6:28908605-28909667	K562	blood:	n/a	chr6:28908717-28908726
9	MYC	chr6:28907422-28909659	K562	blood:	n/a	n/a
10	CTBP2	chr6:28908143-28909186	H1-hESC	embryonic stem cell:	n/a	n/a
11	BCLAF1	chr6:28908498-28909568	GM12878	blood:	n/a	chr6:28909307-28909316
12	MXI1	chr6:28908263-28909519	Hela-S3	cervix:	n/a	n/a
13	ZNF384	chr6:28908559-28909722	K562	blood:	n/a	n/a
14	JUND	chr6:28908050-28909126	H1-hESC	embryonic stem cell:	n/a	chr6:28908663-28908671 chr6:28908662-28908672 chr6:28908661-28908673
15	TCF12	chr6:28907813-28909791	A549	lung:	n/a	n/a
16	MXI1	chr6:28908356-28909637	GM12878	blood:	n/a	n/a
17	TEAD4	chr6:28908002-28909129	H1-hESC	embryonic stem cell:	n/a	n/a
18	POLR2A	chr6:28908006-28908677	H1-hESC	embryonic stem cell:	n/a	n/a
19	BACH1	chr6:28908406-28909506	K562	blood:	n/a	chr6:28908660-28908674
20	CBX3	chr6:28908169-28909746	K562	blood:	n/a	n/a
21	MYC	chr6:28908395-28909652	NB4	blood:	n/a	n/a
22	MBD4	chr6:28908525-28909681	HepG2	liver:	n/a	n/a
23	TEAD4	chr6:28907159-28910093	K562	blood:	n/a	n/a
24	ZNF143	chr6:28908176-28908953	GM12878	blood:	n/a	chr6:28908590-28908599
25	EP300	chr6:28908555-28909559	GM12878	blood:	n/a	chr6:28908717-28908726
26	SIN3AK20	chr6:28907789-28909007	H1-hESC	embryonic stem cell:	n/a	n/a
27	ATF2	chr6:28908503-28909638	GM12878	blood:	n/a	n/a
28	SIN3A	chr6:28907782-28910012	H1-hESC	embryonic stem cell:	n/a	n/a
29	MAX	chr6:28908481-28909379	A549	lung:	n/a	n/a
30	GATA2	chr6:28908510-28909544	HUVEC	blood vessel:	n/a	n/a
31	BCLAF1	chr6:28908557-28909693	GM12878	blood:	n/a	chr6:28909307-28909316
32	ATF3	chr6:28907986-28909765	HCT-116	colon:	n/a	n/a
33	RUNX3	chr6:28908552-28909636	GM12878	blood:	n/a	n/a
34	CEBPB	chr6:28908593-28909620	A549	lung:	n/a	n/a
35	TEAD4	chr6:28908585-28909116	H1-hESC	embryonic stem cell:	n/a	n/a
36	NFIC	chr6:28908461-28909641	HepG2	liver:	n/a	n/a
37	ZNF143	chr6:28908409-28909593	K562	blood:	n/a	chr6:28908590-28908599
38	RPC155	chr6:28908612-28909662	K562	blood:	n/a	n/a
39	POLR2A	chr6:28908513-28908736	H1-hESC	embryonic stem cell:	n/a	n/a
40	ATF3	chr6:28908417-28909745	A549	lung:	n/a	n/a
41	TBL1XR1	chr6:28908095-28909831	GM12878	blood:	n/a	n/a
42	GTF3C2	chr6:28907094-28909901	Hela-S3	cervix:	n/a	n/a
43	FOXM1	chr6:28908574-28909695	GM12878	blood:	n/a	n/a
44	RUNX3	chr6:28908288-28909604	GM12878	blood:	n/a	n/a
45	MAX	chr6:28908024-28909658	A549	lung:	n/a	n/a
46	ATF3	chr6:28908091-28909866	A549	lung:	n/a	n/a
47	PAX5	chr6:28908470-28908997	GM12878	blood:	n/a	chr6:28908667-28908676
48	FOS	chr6:28908599-28909333	MCF10A-Er-Src	breast:	n/a	chr6:28908663-28908671 chr6:28908662-28908672 chr6:28908661-28908673
49	MYC	chr6:28908356-28909515	MCF10A-Er-Src	breast:	n/a	n/a
50	USF1	chr6:28908432-28909100	A549	lung:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:28908567-28908617	ProgFib	skin:	n/a
2	chr6:28908579-28908629	Jurkat	blood:	n/a
3	chr6:28908579-28908629	SK-N-MC	brain:	n/a
4	chr6:28908567-28908617	HCPEpiC	choroid plexus:	n/a
5	chr6:28908579-28908629	AG10803	skin:	n/a
6	chr6:28908567-28908617	IMR90	lung:	fetal
7	chr6:28908579-28908629	HMEC	breast:	n/a
8	chr6:28908579-28908629	PANC-1	pancreas:	n/a
9	chr6:28908579-28908629	NHDF-neo	bronchial:	n/a
10	chr6:28908579-28908629	CMK	blood:	n/a
11	chr6:28908567-28908617	U87	brain:	n/a
12	chr6:28908579-28908629	MCF10A-Er-Src	breast:	n/a
13	chr6:28908579-28908629	HL-60	blood:	n/a
14	chr6:28908567-28908617	GM19239	blood:	n/a
15	chr6:28908567-28908617	HEK293	kidney:	embryo
16	chr6:28908567-28908617	HCM	heart:	n/a
17	chr6:28908567-28908617	NHBE	bronchial:	n/a
18	chr6:28908579-28908629	A549	lung:	n/a
19	chr6:28908579-28908629	SKMC	muscle:	n/a
20	chr6:28908567-28908617	MCF-7	breast:	n/a
21	chr6:28908579-28908629	HRPEpiC	eye:	n/a
22	chr6:28908567-28908617	HCT-116	colon:	n/a
23	chr6:28908567-28908617	PrEC	prostate:	n/a
24	chr6:28908579-28908629	AG04450	lung:	fetal
25	chr6:28908567-28908617	Jurkat	blood:	n/a
26	chr6:28908579-28908629	SK-N-SH_RA	brain:	n/a
27	chr6:28908579-28908629	NH-A	brain:	n/a
28	chr6:28908567-28908617	HRE	kidney:	n/a
29	chr6:28908579-28908629	HCM	heart:	n/a
30	chr6:28908579-28908629	SK-N-SH	brain:	n/a
31	chr6:28908567-28908617	HNPCEpiC	eye:	n/a
32	chr6:28908567-28908617	AG09309	skin:	n/a
33	chr6:28908567-28908617	HL-60	blood:	n/a
34	chr6:28908579-28908629	HRE	kidney:	n/a
35	chr6:28908567-28908617	HCF	heart:	n/a
36	chr6:28908567-28908617	SK-N-SH	brain:	n/a
37	chr6:28908567-28908617	BE2_C	brain:	n/a
38	chr6:28908567-28908617	K562	blood:	n/a
39	chr6:28908567-28908617	H1-hESC	embryonic stem cell:	embryo
40	chr6:28908579-28908629	HCF	heart:	n/a
41	chr6:28908567-28908617	ovcar-3	ovarian:	n/a
42	chr6:28908567-28908617	Hela-S3	cervix:	n/a
43	chr6:28908579-28908629	HIPEpiC	eye:	n/a
44	chr6:28908579-28908629	GM19239	blood:	n/a
45	chr6:28908567-28908617	SKMC	muscle:	n/a
46	chr6:28908579-28908629	HepG2	liver:	n/a
47	chr6:28908579-28908629	HUVEC	blood vessel:	n/a
48	chr6:28908579-28908629	AG09309	skin:	n/a
49	chr6:28908567-28908617	A549	lung:	n/a
50	chr6:28908579-28908629	GM06990	blood:	n/a

(count:17 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:28888957..28894217-chr6:28902105..28913114,27	MCF-7	breast:
2	chr6:28859278..28869415-chr6:28906395..28912460,18	K562	blood:
3	chr6:28856688..28858917-chr6:28907185..28909608,2	K562	blood:
4	chr6:28908321..28911202-chr6:103515957..103517476,2	K562	blood:
5	chr6:28694415..28696951-chr6:28906885..28909854,2	K562	blood:
6	chr6:28806425..28808572-chr6:28907026..28910761,3	K562	blood:
7	chr6:28906950..28909090-chr6:28957555..28960455,2	K562	blood:
8	chr6:28906972..28909678-chr6:28910352..28912254,2	MCF-7	breast:
9	chr6:28886838..28893375-chr6:28904762..28912890,19	K562	blood:
10	chr6:28846715..28849076-chr6:28906590..28908928,2	K562	blood:
11	chr6:28907315..28909915-chr6:28920300..28923261,2	MCF-7	breast:
12	chr6:28907996..28910654-chr6:28948439..28951310,2	MCF-7	breast:
13	chr6:28907069..28909532-chr6:28910998..28913070,2	K562	blood:
14	chr6:28803772..28808857-chr6:28906937..28913057,11	K562	blood:
15	chr6:28844035..28846398-chr6:28907604..28909519,2	K562	blood:
16	chr6:28905933..28927444-chr6:28943937..28954526,53	K562	blood:
17	chr6:28803772..28806116-chr6:28907591..28909225,2	K562	blood:

No data

Variant related genes	Relation type
C6orf100	TF binding region
C6orf100	CpG island
ENSG00000204709	Chromatin interaction
ENSG00000204713	Chromatin interaction
ENSG00000227214	Chromatin interaction
ENSG00000224157	Chromatin interaction
ENSG00000225173	Chromatin interaction
ENSG00000263426	Chromatin interaction
ENSG00000233366	Chromatin interaction

Extended variants
information (count: 99 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:95)

rs_ID	r²[population]
rs1002925	0.81[ASN][1000 genomes]
rs1005123	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1237485	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs1476016	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1543796	0.87[ASN][1000 genomes]
rs1794587	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs184093	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs2013848	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2032500	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2071785	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2071790	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs209122	0.89[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs209126	0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs209128	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs209129	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs209137	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs209138	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs209148	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs209149	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs209152	0.83[ASN][1000 genomes]
rs209153	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs209160	0.84[ASN][1000 genomes]
rs209161	0.81[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs209163	0.81[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs209164	0.83[ASN][1000 genomes]
rs209176	0.81[ASN][1000 genomes]
rs2157312	0.86[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs2157313	0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs2179648	0.85[ASN][1000 genomes]
rs2187807	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2187808	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2269555	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2394512	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2765229	0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs3129792	0.91[ASN][1000 genomes]
rs3129793	0.89[ASN][1000 genomes]
rs3130841	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs3130842	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3130886	0.92[ASN][1000 genomes]
rs3130889	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs3130897	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs3131070	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3131074	0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs3131077	0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs3131100	0.83[ASN][1000 genomes]
rs3131102	0.88[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs3132386	0.81[ASN][1000 genomes]
rs3135303	0.81[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs3135315	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3135321	0.91[ASN][1000 genomes]
rs3135322	0.91[ASN][1000 genomes]
rs3135323	0.88[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3135324	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3135326	0.83[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs3135327	0.86[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs3135328	0.89[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs381808	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs393431	0.81[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs4427026	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4713186	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4713187	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4713188	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4713190	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4713192	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4947339	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6456876	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6456880	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6456883	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6456891	0.83[ASN][1000 genomes]
rs6901599	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6904975	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6906909	0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6916161	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6920392	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6931823	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs763009	0.95[ASN][1000 genomes]
rs7743189	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7755875	0.81[ASN][1000 genomes]
rs7761547	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7768299	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9257401	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9257403	0.82[ASN][1000 genomes]
rs9257404	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9257405	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9257408	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9257421	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9257447	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9257449	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9257455	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9257461	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9257464	0.83[EUR][1000 genomes]
rs9348816	0.87[ASN][1000 genomes]
rs9393939	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9468467	0.85[ASN][1000 genomes]
rs9468472	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv883518	chr6:28792477-28911802	Active TSS Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	56 gene(s)	inside rSNPs	diseases
2	nsv883519	chr6:28792477-28936556	Transcr. at gene 5' and 3' Genic enhancers Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
3	nsv427748	chr6:28831888-28999434	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	62 gene(s)	inside rSNPs	diseases
4	nsv830622	chr6:28861667-29015804	Flanking Active TSS Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	59 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:28906600-28912600	Active TSS	HUES6 Cell Line	embryonic stem cell
2	chr6:28907200-28910000	Active TSS	iPS-15b Cell Line	embryonic stem cell
3	chr6:28907200-28910000	Active TSS	K562	blood
4	chr6:28907400-28909400	Active TSS	Placenta	Placenta
5	chr6:28907400-28909600	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr6:28907400-28909600	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr6:28907400-28909800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr6:28907400-28909800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr6:28907400-28909800	Active TSS	GM12878-XiMat	blood
10	chr6:28907400-28909800	Active TSS	Hela-S3	cervix
11	chr6:28907400-28910000	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr6:28907400-28910000	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr6:28907400-28910000	Active TSS	iPS-20b Cell Line	embryonic stem cell
14	chr6:28907400-28910000	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr6:28907400-28910000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr6:28907400-28910200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr6:28907400-28910200	Active TSS	HUES48 Cell Line	embryonic stem cell
18	chr6:28907400-28910200	Active TSS	HUES64 Cell Line	embryonic stem cell
19	chr6:28907400-28910200	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr6:28907400-28910200	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
21	chr6:28907400-28910200	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr6:28907400-28910200	Active TSS	Psoas Muscle	Psoas
23	chr6:28907400-28912400	Active TSS	H1 Cell Line	embryonic stem cell
24	chr6:28907400-28912400	Active TSS	H9 Cell Line	embryonic stem cell
25	chr6:28907400-28912400	Active TSS	iPS-18 Cell Line	embryonic stem cell
26	chr6:28907400-28912400	Active TSS	A549	lung
27	chr6:28907400-28912800	Active TSS	ES-I3 Cell Line	embryonic stem cell
28	chr6:28907400-28913400	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr6:28907600-28909000	Active TSS	Fetal Adrenal Gland	Adrenal Gland
30	chr6:28907600-28909400	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr6:28907600-28909800	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
32	chr6:28907600-28910000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
33	chr6:28907600-28910000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr6:28907600-28910200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr6:28907600-28910200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr6:28907600-28910200	Flanking Active TSS	Adipose Nuclei	Adipose
37	chr6:28907600-28910200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
38	chr6:28907800-28908800	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
39	chr6:28907800-28908800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
40	chr6:28907800-28908800	Flanking Active TSS	Liver	Liver
41	chr6:28907800-28909000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
42	chr6:28907800-28909000	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
43	chr6:28907800-28909600	Active TSS	Aorta	Aorta
44	chr6:28907800-28909600	Active TSS	Brain Anterior Caudate	brain
45	chr6:28907800-28909600	Active TSS	Brain Cingulate Gyrus	brain
46	chr6:28907800-28909600	Active TSS	Brain Substantia Nigra	brain
47	chr6:28907800-28909600	Active TSS	Fetal Intestine Small	intestine
48	chr6:28907800-28909600	Active TSS	Fetal Lung	lung
49	chr6:28907800-28909600	Active TSS	NHLF	lung
50	chr6:28907800-28909600	Active TSS	Osteobl	bone

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links