The 2.0 version of rSNPBase

Variant report

Variant rs9290048
Chromosome Location chr3:159551878-159551879
allele A/C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:159542200-159554200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr3:159543600-159555200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr3:159543800-159555200 Weak transcription Lung lung
4 chr3:159546200-159552200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr3:159546400-159552000 Enhancers Primary hematopoietic stem cells short term culture blood
6 chr3:159546400-159552000 Enhancers Brain Cingulate Gyrus brain
7 chr3:159546400-159552000 Enhancers Brain Substantia Nigra brain
8 chr3:159547000-159557400 Weak transcription Fetal Kidney kidney
9 chr3:159547600-159552800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr3:159547800-159556800 Weak transcription Brain Germinal Matrix brain
11 chr3:159548600-159554000 Weak transcription Fetal Stomach stomach
12 chr3:159548600-159554200 Weak transcription Hela-S3 cervix
13 chr3:159548600-159555000 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr3:159548600-159555200 Weak transcription Left Ventricle heart
15 chr3:159548800-159552800 Weak transcription HUVEC blood vessel
16 chr3:159548800-159554000 Weak transcription Stomach Smooth Muscle stomach
17 chr3:159548800-159554200 Weak transcription Adipose Nuclei Adipose
18 chr3:159548800-159554200 Weak transcription NH-A brain
19 chr3:159548800-159554400 Weak transcription NHEK skin
20 chr3:159549000-159552600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr3:159549000-159553000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr3:159549000-159553000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr3:159549000-159553200 Weak transcription Rectal Smooth Muscle rectum
24 chr3:159549000-159553800 Weak transcription Fetal Heart heart
25 chr3:159549000-159554000 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr3:159549000-159554000 Weak transcription Psoas Muscle Psoas
27 chr3:159549000-159554000 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr3:159549000-159554200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr3:159549000-159554200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr3:159549000-159554200 Weak transcription Osteobl bone
31 chr3:159549000-159555000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr3:159549000-159555200 Weak transcription Right Atrium heart
33 chr3:159549000-159555200 Weak transcription Right Ventricle heart
34 chr3:159549000-159555600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr3:159549200-159554000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr3:159549200-159554000 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr3:159549200-159554000 Weak transcription HSMM muscle
38 chr3:159549200-159554200 Weak transcription Muscle Satellite Cultured Cells --
39 chr3:159549400-159554200 Weak transcription HMEC breast
40 chr3:159549600-159553000 Weak transcription NHDF-Ad bronchial
41 chr3:159549600-159553800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr3:159549600-159554000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr3:159549600-159554200 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr3:159549600-159554200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr3:159549800-159553000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr3:159550000-159555000 Weak transcription Fetal Muscle Leg muscle
47 chr3:159550200-159557600 Weak transcription Primary B cells from cord blood blood
48 chr3:159550200-159557600 Weak transcription Spleen Spleen
49 chr3:159550600-159553000 Weak transcription Colon Smooth Muscle Colon
50 chr3:159550600-159554000 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015