Variant report

Variant	rs9307850
Chromosome Location	chr4:149762698-149762699
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:149761982..149763891-chr4:149764266..149767251,2	MCF-7	breast:

Extended variants
information (count: 63 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:63)

rs_ID	r²[population]
rs10021663	0.82[ASN][1000 genomes]
rs13127141	0.97[ASN][1000 genomes]
rs1357440	0.95[ASN][1000 genomes]
rs1403455	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1474304	0.92[ASN][1000 genomes]
rs1523012	0.93[ASN][1000 genomes]
rs1523013	0.95[ASN][1000 genomes]
rs1523014	0.95[ASN][1000 genomes]
rs1523015	0.95[ASN][1000 genomes]
rs1523016	0.95[ASN][1000 genomes]
rs1523017	0.95[ASN][1000 genomes]
rs1634070	0.95[ASN][1000 genomes]
rs1634071	0.95[ASN][1000 genomes]
rs1634082	0.92[ASN][1000 genomes]
rs1634083	0.92[ASN][1000 genomes]
rs1634097	0.86[ASN][1000 genomes]
rs1719678	0.86[ASN][1000 genomes]
rs1719683	0.92[ASN][1000 genomes]
rs1719684	0.92[ASN][1000 genomes]
rs17584189	0.99[ASN][1000 genomes]
rs17623254	0.84[ASN][1000 genomes]
rs17721605	0.98[ASN][1000 genomes]
rs1916243	0.99[ASN][1000 genomes]
rs2103065	0.99[ASN][1000 genomes]
rs2358680	0.86[ASN][1000 genomes]
rs2520496	0.86[ASN][1000 genomes]
rs28620521	0.97[AFR][1000 genomes]
rs4240350	0.98[ASN][1000 genomes]
rs4240351	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4240352	0.84[ASN][1000 genomes]
rs471967	0.92[ASN][1000 genomes]
rs4835147	0.86[ASN][1000 genomes]
rs4835546	0.99[ASN][1000 genomes]
rs4835549	0.83[ASN][1000 genomes]
rs538951	0.96[ASN][1000 genomes]
rs540810	0.94[ASN][1000 genomes]
rs541498	0.97[ASN][1000 genomes]
rs552274	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs58528421	0.82[ASN][1000 genomes]
rs6535645	0.84[ASN][1000 genomes]
rs6828358	0.97[ASN][1000 genomes]
rs6846355	0.86[ASN][1000 genomes]
rs6858768	0.86[ASN][1000 genomes]
rs7668071	0.86[ASN][1000 genomes]
rs7682891	0.86[ASN][1000 genomes]
rs7695802	0.99[ASN][1000 genomes]
rs7697941	0.98[ASN][1000 genomes]
rs853695	0.84[ASN][1000 genomes]
rs853705	0.92[ASN][1000 genomes]
rs853707	0.89[ASN][1000 genomes]
rs853708	0.88[ASN][1000 genomes]
rs853709	0.89[ASN][1000 genomes]
rs853728	0.86[ASN][1000 genomes]
rs853730	0.86[ASN][1000 genomes]
rs853731	0.86[ASN][1000 genomes]
rs860501	0.92[ASN][1000 genomes]
rs860502	0.91[ASN][1000 genomes]
rs860503	0.89[ASN][1000 genomes]
rs861225	0.89[ASN][1000 genomes]
rs862655	0.86[ASN][1000 genomes]
rs862656	0.86[ASN][1000 genomes]
rs862658	0.99[ASN][1000 genomes]
rs864093	0.86[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:149756600-149763800	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr4:149756800-149763800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr4:149759200-149775600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr4:149761400-149763000	Enhancers	Placenta	Placenta
5	chr4:149762600-149764000	Enhancers	Colon Smooth Muscle	Colon

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