Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:49813281..49816019-chr13:49822411..49824053,2	K562	blood:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1407826	1.00[AMR][1000 genomes]
rs1924658	1.00[EUR][1000 genomes]
rs1937182	1.00[AMR][1000 genomes]
rs1983806	1.00[AMR][1000 genomes]
rs2181906	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs3012124	1.00[AMR][1000 genomes]
rs3012130	1.00[AMR][1000 genomes]
rs4942807	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57277286	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57541605	1.00[EUR][1000 genomes]
rs57590763	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58064396	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58096573	1.00[EUR][1000 genomes]
rs58372993	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58588833	1.00[EUR][1000 genomes]
rs61192069	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61517389	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6561495	1.00[AMR][1000 genomes]
rs6561498	1.00[AMR][1000 genomes]
rs6561508	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6561512	1.00[EUR][1000 genomes]
rs6561513	1.00[EUR][1000 genomes]
rs6561514	1.00[EUR][1000 genomes]
rs6650333	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7325076	1.00[EUR][1000 genomes]
rs7326409	1.00[AMR][1000 genomes]
rs7338704	1.00[AMR][1000 genomes]
rs7999767	1.00[AMR][1000 genomes]
rs9568185	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049117	chr13:49089476-49928945	Enhancers Strong transcription Weak transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
2	nsv832607	chr13:49756458-49920894	Flanking Bivalent TSS/Enh Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:49808000-49821200	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr13:49810600-49815200	Weak transcription	Stomach Smooth Muscle	stomach
3	chr13:49812600-49813600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr13:49812600-49813600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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