Variant report

Variant	rs9321134
Chromosome Location	chr6:129072839-129072840
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1281245	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs1281246	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs1508445	0.81[AFR][1000 genomes]
rs17056023	1.00[CEU][hapmap]
rs17056045	1.00[CEU][hapmap]
rs17056165	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs56830254	0.81[EUR][1000 genomes]
rs57757547	1.00[EUR][1000 genomes]
rs6911175	0.92[AFR][1000 genomes]
rs699441	0.81[EUR][1000 genomes]
rs73772070	0.81[EUR][1000 genomes]
rs73772074	0.81[EUR][1000 genomes]
rs73772352	0.81[EUR][1000 genomes]
rs774275	0.89[AFR][1000 genomes]
rs774276	0.94[AFR][1000 genomes]
rs774282	0.83[YRI][hapmap];0.84[AFR][1000 genomes]
rs774286	0.81[EUR][1000 genomes]
rs774288	0.81[EUR][1000 genomes]
rs812854	0.84[AFR][1000 genomes]
rs9402071	0.96[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030330	chr6:129008538-129095108	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:129064400-129089200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr6:129072000-129075400	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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