Variant report

Variant	rs9321916
Chromosome Location	chr6:143836532-143836533
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:143835407..143839181-chr6:143839359..143841894,3	K562	blood:
2	chr6:143833776..143837281-chr6:143848797..143850662,3	MCF-7	breast:
3	chr6:143836199..143838556-chr6:143869163..143871034,2	MCF-7	breast:
4	chr6:143835971..143837808-chr6:143863905..143866347,2	MCF-7	breast:
5	chr6:143829496..143838775-chr6:143854591..143861568,17	MCF-7	breast:
6	chr6:143833885..143836772-chr6:144163950..144165964,2	MCF-7	breast:
7	chr6:143834115..143837109-chr6:143945007..143947118,2	K562	blood:
8	chr6:143834628..143837474-chr6:143844172..143846765,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000112419	Chromatin interaction
ENSG00000135521	Chromatin interaction

rs_ID	r²[population]
rs170344	0.90[CEU][hapmap];0.81[JPT][hapmap];0.88[EUR][1000 genomes]
rs573119	0.90[CEU][hapmap];0.81[JPT][hapmap];0.90[EUR][1000 genomes]
rs656935	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]

Chromatin state (count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143833200-143838200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr6:143833200-143849600	Weak transcription	Primary T cells from cord blood	blood
3	chr6:143833400-143836600	Weak transcription	Brain Substantia Nigra	brain
4	chr6:143833400-143837000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr6:143833400-143837200	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr6:143833400-143837400	Weak transcription	Primary monocytes fromperipheralblood	blood
7	chr6:143833400-143837400	Enhancers	Fetal Heart	heart
8	chr6:143833400-143837800	Weak transcription	Primary B cells from peripheral blood	blood
9	chr6:143833400-143837800	Weak transcription	Rectal Mucosa Donor 31	rectum
10	chr6:143833400-143838400	Weak transcription	Rectal Mucosa Donor 29	rectum
11	chr6:143833400-143838400	Weak transcription	Sigmoid Colon	Sigmoid Colon
12	chr6:143833400-143849400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
13	chr6:143833600-143837800	Weak transcription	Fetal Thymus	thymus
14	chr6:143833600-143838200	Weak transcription	Fetal Intestine Small	intestine
15	chr6:143834600-143836600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
16	chr6:143834600-143837000	Weak transcription	GM12878-XiMat	blood
17	chr6:143834600-143838000	Enhancers	Placenta	Placenta
18	chr6:143834600-143855800	Weak transcription	Duodenum Mucosa	Duodenum
19	chr6:143834800-143837600	Weak transcription	K562	blood
20	chr6:143835000-143850000	Weak transcription	Fetal Intestine Large	intestine
21	chr6:143835200-143837600	Enhancers	Skeletal Muscle Female	skeletal muscle
22	chr6:143835800-143836800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr6:143835800-143837000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
24	chr6:143835800-143837000	Enhancers	Gastric	stomach
25	chr6:143835800-143837200	Enhancers	Fetal Lung	lung
26	chr6:143835800-143837400	Enhancers	Colon Smooth Muscle	Colon
27	chr6:143835800-143838800	Enhancers	Stomach Mucosa	stomach
28	chr6:143836000-143836600	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
29	chr6:143836000-143836600	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
30	chr6:143836000-143836600	Enhancers	Fetal Brain Female	brain
31	chr6:143836000-143836600	Enhancers	Right Ventricle	heart
32	chr6:143836000-143836800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
33	chr6:143836000-143836800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
34	chr6:143836000-143836800	Enhancers	NHLF	lung
35	chr6:143836000-143837000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr6:143836000-143837000	Enhancers	Cortex derived primary cultured neurospheres	brain
37	chr6:143836000-143837000	Enhancers	Adipose Nuclei	Adipose
38	chr6:143836000-143837000	Enhancers	NHDF-Ad	bronchial
39	chr6:143836000-143837200	Enhancers	Fetal Stomach	stomach
40	chr6:143836000-143837200	Enhancers	Ovary	ovary
41	chr6:143836000-143837200	Enhancers	Skeletal Muscle Male	skeletal muscle
42	chr6:143836000-143837400	Enhancers	Fetal Muscle Trunk	muscle
43	chr6:143836000-143837400	Enhancers	Lung	lung
44	chr6:143836000-143837400	Enhancers	Pancreas	Pancrea
45	chr6:143836000-143837400	Enhancers	Psoas Muscle	Psoas
46	chr6:143836000-143838400	Enhancers	Fetal Muscle Leg	muscle
47	chr6:143836000-143838800	Enhancers	Left Ventricle	heart
48	chr6:143836200-143836600	Flanking Active TSS	Stomach Smooth Muscle	stomach
49	chr6:143836200-143836600	Enhancers	Osteobl	bone
50	chr6:143836200-143836800	Enhancers	Breast Myoepithelial Primary Cells	Breast

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