Variant report

Variant	rs935900
Chromosome Location	chr3:56347925-56347926
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs12493980	0.85[AMR][1000 genomes]
rs1452211	0.85[AMR][1000 genomes]
rs1973033	0.88[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs2053956	0.85[AMR][1000 genomes]
rs4591474	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4974135	1.00[EUR][1000 genomes]
rs4974207	0.81[EUR][1000 genomes]
rs6445781	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6787350	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6801157	0.81[EUR][1000 genomes]
rs9822225	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9824530	0.85[AMR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:56343800-56348800	Weak transcription	Fetal Heart	heart
2	chr3:56344000-56357400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr3:56345000-56349000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr3:56346200-56348000	Weak transcription	Fetal Muscle Leg	muscle
5	chr3:56347400-56349000	Enhancers	Breast Myoepithelial Primary Cells	Breast
6	chr3:56347600-56349200	Enhancers	Psoas Muscle	Psoas
7	chr3:56347600-56350200	Enhancers	HSMMtube	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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