Variant report

Variant	rs6787350
Chromosome Location	chr3:56303922-56303923
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs12493980	0.85[AMR][1000 genomes]
rs1452211	0.85[AMR][1000 genomes]
rs1485671	0.81[EUR][1000 genomes]
rs2053956	0.85[AMR][1000 genomes]
rs2873304	0.86[EUR][1000 genomes]
rs4585163	0.80[EUR][1000 genomes]
rs4591474	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4974135	0.90[EUR][1000 genomes]
rs4974207	0.90[EUR][1000 genomes]
rs547732	0.85[EUR][1000 genomes]
rs6445766	0.81[EUR][1000 genomes]
rs6445781	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6800915	0.80[EUR][1000 genomes]
rs6801004	0.80[EUR][1000 genomes]
rs6801157	0.90[EUR][1000 genomes]
rs690223	0.81[EUR][1000 genomes]
rs935900	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9822225	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9824530	0.85[AMR][1000 genomes];0.80[EUR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:56288800-56311400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr3:56302800-56304600	Enhancers	Ovary	ovary
3	chr3:56303200-56304200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr3:56303200-56304600	Enhancers	Fetal Stomach	stomach
5	chr3:56303400-56304200	Enhancers	Brain Hippocampus Middle	brain
6	chr3:56303400-56304400	Enhancers	Fetal Kidney	kidney
7	chr3:56303600-56304600	Enhancers	Fetal Heart	heart
8	chr3:56303800-56304200	Weak transcription	Fetal Brain Male	brain
9	chr3:56303800-56304200	Enhancers	NH-A	brain
10	chr3:56303800-56304400	Weak transcription	Fetal Muscle Leg	muscle

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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