Variant report

Variant rs9362209
Chromosome Location chr6:86114491-86114492
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:86108400-86116600 Enhancers Fetal Intestine Small intestine
2 chr6:86110200-86115800 Enhancers Primary T killer naive cells fromperipheralblood blood
3 chr6:86110200-86116000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr6:86110800-86116600 Enhancers Fetal Intestine Large intestine
5 chr6:86111000-86114600 Enhancers HUES6 Cell Line embryonic stem cell
6 chr6:86111000-86115800 Enhancers Primary T cells from cord blood blood
7 chr6:86111000-86116200 Enhancers Small Intestine intestine
8 chr6:86111000-86116600 Enhancers Placenta Amnion Placenta Amnion
9 chr6:86111200-86114600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr6:86111200-86115200 Enhancers iPS-20b Cell Line embryonic stem cell
11 chr6:86111200-86116200 Enhancers Stomach Mucosa stomach
12 chr6:86111200-86116400 Enhancers Placenta Placenta
13 chr6:86111400-86115200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
14 chr6:86111400-86115600 Enhancers Sigmoid Colon Sigmoid Colon
15 chr6:86111600-86115000 Weak transcription Primary hematopoietic stem cells blood
16 chr6:86111800-86115000 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr6:86112000-86114600 Enhancers Fetal Adrenal Gland Adrenal Gland
18 chr6:86112000-86114800 Weak transcription Dnd41 blood
19 chr6:86112200-86114600 Weak transcription GM12878-XiMat blood
20 chr6:86112600-86115400 Enhancers Esophagus oesophagus
21 chr6:86112800-86114600 Flanking Active TSS Muscle Satellite Cultured Cells --
22 chr6:86112800-86114600 Flanking Active TSS NH-A brain
23 chr6:86112800-86114800 Enhancers HUES48 Cell Line embryonic stem cell
24 chr6:86112800-86115000 Enhancers HUES64 Cell Line embryonic stem cell
25 chr6:86112800-86115600 Flanking Active TSS NHEK skin
26 chr6:86112800-86115800 Enhancers Cortex derived primary cultured neurospheres brain
27 chr6:86113000-86114600 Flanking Active TSS Osteobl bone
28 chr6:86113000-86115600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr6:86113000-86115600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
30 chr6:86113200-86114600 Enhancers iPS-15b Cell Line embryonic stem cell
31 chr6:86113400-86115400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr6:86113400-86115400 Weak transcription Lung lung
33 chr6:86113400-86115400 Weak transcription Ovary ovary
34 chr6:86113400-86131600 Weak transcription Right Atrium heart
35 chr6:86113600-86114600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr6:86113600-86114600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr6:86113600-86115000 Weak transcription Adipose Nuclei Adipose
38 chr6:86113600-86115400 Enhancers Liver Liver
39 chr6:86113600-86115400 Flanking Active TSS HUVEC blood vessel
40 chr6:86113600-86115600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr6:86113800-86114800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr6:86113800-86115000 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr6:86113800-86115600 Enhancers ES-I3 Cell Line embryonic stem cell
44 chr6:86113800-86117800 Weak transcription ES-WA7 Cell Line embryonic stem cell
45 chr6:86113800-86118000 Enhancers NHLF lung
46 chr6:86114000-86114600 Enhancers H1 Cell Line embryonic stem cell
47 chr6:86114000-86114600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr6:86114000-86114600 Active TSS HepG2 liver
49 chr6:86114000-86114800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr6:86114000-86114800 Weak transcription Fetal Lung lung

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