Variant report

Variant rs638745
Chromosome Location chr6:86115587-86115588
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:86108400-86116600 Enhancers Fetal Intestine Small intestine
2 chr6:86110200-86115800 Enhancers Primary T killer naive cells fromperipheralblood blood
3 chr6:86110200-86116000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr6:86110800-86116600 Enhancers Fetal Intestine Large intestine
5 chr6:86111000-86115800 Enhancers Primary T cells from cord blood blood
6 chr6:86111000-86116200 Enhancers Small Intestine intestine
7 chr6:86111000-86116600 Enhancers Placenta Amnion Placenta Amnion
8 chr6:86111200-86116200 Enhancers Stomach Mucosa stomach
9 chr6:86111200-86116400 Enhancers Placenta Placenta
10 chr6:86111400-86115600 Enhancers Sigmoid Colon Sigmoid Colon
11 chr6:86112800-86115600 Flanking Active TSS NHEK skin
12 chr6:86112800-86115800 Enhancers Cortex derived primary cultured neurospheres brain
13 chr6:86113000-86115600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr6:86113000-86115600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
15 chr6:86113400-86131600 Weak transcription Right Atrium heart
16 chr6:86113600-86115600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr6:86113800-86115600 Enhancers ES-I3 Cell Line embryonic stem cell
18 chr6:86113800-86117800 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr6:86113800-86118000 Enhancers NHLF lung
20 chr6:86114000-86116000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr6:86114000-86116600 Enhancers Pancreas Pancrea
22 chr6:86114400-86115600 Enhancers Skeletal Muscle Male skeletal muscle
23 chr6:86114400-86115600 Flanking Active TSS Hela-S3 cervix
24 chr6:86114400-86115800 Enhancers Fetal Thymus thymus
25 chr6:86114400-86118200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
26 chr6:86114600-86116000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr6:86114600-86117600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr6:86114600-86118000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr6:86114600-86118200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
30 chr6:86114800-86115600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr6:86114800-86115600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr6:86114800-86115600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr6:86114800-86115600 Flanking Active TSS Muscle Satellite Cultured Cells --
34 chr6:86114800-86115600 Enhancers Dnd41 blood
35 chr6:86114800-86115600 Flanking Active TSS HSMM muscle
36 chr6:86114800-86115800 Enhancers Fetal Lung lung
37 chr6:86115000-86115600 Enhancers Duodenum Mucosa Duodenum
38 chr6:86115000-86117200 Enhancers NHDF-Ad bronchial
39 chr6:86115200-86115600 Enhancers Left Ventricle heart
40 chr6:86115200-86115600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
41 chr6:86115200-86116400 Enhancers Gastric stomach
42 chr6:86115200-86116400 Enhancers HSMMtube muscle
43 chr6:86115200-86117400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr6:86115200-86117600 Enhancers HMEC breast
45 chr6:86115400-86115600 Flanking Active TSS Liver Liver
46 chr6:86115400-86115600 Enhancers Fetal Muscle Trunk muscle
47 chr6:86115400-86115600 Enhancers Ovary ovary
48 chr6:86115400-86115800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr6:86115400-86115800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
50 chr6:86115400-86115800 Flanking Active TSS Colonic Mucosa Colon

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