Variant report

Variant rs4373339
Chromosome Location chr6:86174044-86174045
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:86163200-86176600 Enhancers Primary T killer naive cells fromperipheralblood blood
2 chr6:86166600-86174800 Enhancers Cortex derived primary cultured neurospheres brain
3 chr6:86167600-86174200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr6:86167800-86176200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr6:86169000-86174200 Enhancers HSMMtube muscle
6 chr6:86170200-86174800 Enhancers Fetal Muscle Leg muscle
7 chr6:86170400-86174600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr6:86171600-86174200 Enhancers NHDF-Ad bronchial
9 chr6:86171800-86176800 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr6:86171800-86185200 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr6:86171800-86186000 Weak transcription Fetal Stomach stomach
12 chr6:86171800-86187600 Weak transcription Colonic Mucosa Colon
13 chr6:86172000-86179000 Weak transcription Pancreas Pancrea
14 chr6:86172200-86174200 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr6:86172200-86174200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr6:86172200-86174200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr6:86172200-86174200 Weak transcription Esophagus oesophagus
18 chr6:86172200-86174200 Enhancers Osteobl bone
19 chr6:86172200-86174400 Weak transcription Brain Substantia Nigra brain
20 chr6:86172200-86174600 Weak transcription Primary B cells from cord blood blood
21 chr6:86172200-86179800 Weak transcription Left Ventricle heart
22 chr6:86172200-86186000 Weak transcription Rectal Smooth Muscle rectum
23 chr6:86172400-86174200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr6:86172400-86174200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
25 chr6:86172400-86174200 Weak transcription Ovary ovary
26 chr6:86172400-86174200 Enhancers NH-A brain
27 chr6:86172400-86174200 Enhancers NHEK skin
28 chr6:86172400-86174400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr6:86172400-86174400 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr6:86172400-86175400 Weak transcription Lung lung
31 chr6:86172400-86176200 Enhancers Primary T cells from cord blood blood
32 chr6:86172400-86178000 Weak transcription Aorta Aorta
33 chr6:86172400-86192800 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr6:86172600-86174200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr6:86172600-86174200 Weak transcription Stomach Smooth Muscle stomach
36 chr6:86172600-86174200 Enhancers HMEC breast
37 chr6:86172600-86174200 Enhancers HSMM muscle
38 chr6:86172600-86174200 Enhancers NHLF lung
39 chr6:86172600-86175400 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr6:86173000-86174200 Enhancers Liver Liver
41 chr6:86173000-86174200 Weak transcription Colon Smooth Muscle Colon
42 chr6:86173200-86174200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr6:86173200-86174200 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr6:86173200-86174800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr6:86173200-86174800 Enhancers Brain Anterior Caudate brain
46 chr6:86173200-86176200 Enhancers GM12878-XiMat blood
47 chr6:86173400-86174800 Enhancers Primary hematopoietic stem cells short term culture blood
48 chr6:86173400-86174800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr6:86173400-86174800 Enhancers HepG2 liver
50 chr6:86173400-86175000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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