Variant report

Variant rs6942065
Chromosome Location chr6:86168265-86168266
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:86160600-86171400 Weak transcription Gastric stomach
2 chr6:86161200-86168600 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr6:86161800-86170400 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr6:86162800-86172600 Enhancers Liver Liver
5 chr6:86163200-86176600 Enhancers Primary T killer naive cells fromperipheralblood blood
6 chr6:86163400-86170600 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr6:86163600-86170400 Weak transcription Spleen Spleen
8 chr6:86163600-86171200 Weak transcription Placenta Placenta
9 chr6:86164000-86169800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr6:86164000-86171200 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr6:86165000-86168400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr6:86165000-86170400 Enhancers GM12878-XiMat blood
13 chr6:86166000-86169000 Enhancers Fetal Muscle Leg muscle
14 chr6:86166000-86169000 Enhancers Ovary ovary
15 chr6:86166000-86171200 Enhancers Primary T cells from cord blood blood
16 chr6:86166200-86173800 Enhancers Hela-S3 cervix
17 chr6:86166400-86169000 Enhancers Primary B cells from peripheral blood blood
18 chr6:86166400-86169200 Weak transcription HepG2 liver
19 chr6:86166600-86174800 Enhancers Cortex derived primary cultured neurospheres brain
20 chr6:86166800-86168600 Enhancers HUVEC blood vessel
21 chr6:86166800-86172600 Enhancers Stomach Smooth Muscle stomach
22 chr6:86167000-86168600 Enhancers NHLF lung
23 chr6:86167200-86168600 Enhancers Primary hematopoietic stem cells short term culture blood
24 chr6:86167200-86168600 Enhancers NHEK skin
25 chr6:86167200-86170800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr6:86167200-86172000 Enhancers HMEC breast
27 chr6:86167400-86168400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr6:86167400-86168400 Enhancers NH-A brain
29 chr6:86167400-86169200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
30 chr6:86167400-86169200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr6:86167400-86169800 Enhancers Colon Smooth Muscle Colon
32 chr6:86167600-86168600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr6:86167600-86169000 Enhancers Primary B cells from cord blood blood
34 chr6:86167600-86169000 Enhancers Brain Anterior Caudate brain
35 chr6:86167600-86169200 Enhancers Duodenum Smooth Muscle Duodenum
36 chr6:86167600-86169400 Enhancers Brain Hippocampus Middle brain
37 chr6:86167600-86170400 Weak transcription Brain Angular Gyrus brain
38 chr6:86167600-86170400 Weak transcription Brain Substantia Nigra brain
39 chr6:86167600-86170400 Enhancers Osteobl bone
40 chr6:86167600-86170800 Enhancers iPS-20b Cell Line embryonic stem cell
41 chr6:86167600-86171400 Enhancers ES-I3 Cell Line embryonic stem cell
42 chr6:86167600-86172400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr6:86167600-86174200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr6:86167800-86168400 Enhancers Primary T helper cells fromperipheralblood blood
45 chr6:86167800-86168600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr6:86167800-86168600 Enhancers HSMM muscle
47 chr6:86167800-86168800 Enhancers Rectal Smooth Muscle rectum
48 chr6:86167800-86169000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr6:86167800-86169200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
50 chr6:86167800-86170600 Enhancers iPS-18 Cell Line embryonic stem cell

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