Variant report

Variant rs9344528
Chromosome Location chr6:86163227-86163228
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:86160000-86164200 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
2 chr6:86160600-86163600 Active TSS Primary T helper cells PMA-I stimulated --
3 chr6:86160600-86163600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr6:86160600-86164600 Weak transcription Pancreas Pancrea
5 chr6:86160600-86168000 Weak transcription Lung lung
6 chr6:86160600-86171400 Weak transcription Gastric stomach
7 chr6:86160800-86167000 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr6:86160800-86168000 Weak transcription Esophagus oesophagus
9 chr6:86161000-86164000 Enhancers Duodenum Mucosa Duodenum
10 chr6:86161200-86163600 Enhancers Sigmoid Colon Sigmoid Colon
11 chr6:86161200-86164000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
12 chr6:86161200-86168600 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr6:86161400-86163400 Flanking Active TSS HepG2 liver
14 chr6:86161400-86164600 Transcr. at gene 5' and 3' NHEK skin
15 chr6:86161600-86163600 Enhancers Colonic Mucosa Colon
16 chr6:86161600-86163600 Enhancers Small Intestine intestine
17 chr6:86161600-86163600 Transcr. at gene 5' and 3' HSMM muscle
18 chr6:86161600-86164200 Transcr. at gene 5' and 3' Osteobl bone
19 chr6:86161600-86167000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr6:86161800-86163400 Enhancers Fetal Stomach stomach
21 chr6:86161800-86163600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
22 chr6:86161800-86166400 Weak transcription Right Atrium heart
23 chr6:86161800-86167600 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr6:86161800-86170400 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr6:86162000-86163400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr6:86162000-86163600 Enhancers Placenta Placenta
27 chr6:86162000-86163800 Flanking Active TSS GM12878-XiMat blood
28 chr6:86162000-86164000 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr6:86162000-86164000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
30 chr6:86162000-86164000 Enhancers Aorta Aorta
31 chr6:86162000-86166400 Weak transcription Brain Anterior Caudate brain
32 chr6:86162200-86163400 Flanking Active TSS Stomach Smooth Muscle stomach
33 chr6:86162200-86164000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
34 chr6:86162400-86163400 Enhancers Primary B cells from peripheral blood blood
35 chr6:86162400-86163600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr6:86162400-86163600 Bivalent Enhancer Adipose Nuclei Adipose
37 chr6:86162400-86164200 Enhancers Colon Smooth Muscle Colon
38 chr6:86162400-86164400 Enhancers Primary B cells from cord blood blood
39 chr6:86162600-86163800 Transcr. at gene 5' and 3' NHDF-Ad bronchial
40 chr6:86162600-86164200 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr6:86162800-86163400 Flanking Active TSS Primary T cells from cord blood blood
42 chr6:86162800-86163400 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
43 chr6:86162800-86163400 Bivalent Enhancer Fetal Thymus thymus
44 chr6:86162800-86163400 Enhancers Rectal Mucosa Donor 29 rectum
45 chr6:86162800-86163400 Transcr. at gene 5' and 3' NHLF lung
46 chr6:86162800-86163600 Enhancers Fetal Muscle Leg muscle
47 chr6:86162800-86163600 Enhancers Spleen Spleen
48 chr6:86162800-86163800 Transcr. at gene 5' and 3' HMEC breast
49 chr6:86162800-86164000 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
50 chr6:86162800-86164000 Enhancers Ovary ovary

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