Variant report

Variant rs4565270
Chromosome Location chr6:86174450-86174451
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:86163200-86176600 Enhancers Primary T killer naive cells fromperipheralblood blood
2 chr6:86166600-86174800 Enhancers Cortex derived primary cultured neurospheres brain
3 chr6:86167800-86176200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr6:86170200-86174800 Enhancers Fetal Muscle Leg muscle
5 chr6:86170400-86174600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr6:86171800-86176800 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr6:86171800-86185200 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr6:86171800-86186000 Weak transcription Fetal Stomach stomach
9 chr6:86171800-86187600 Weak transcription Colonic Mucosa Colon
10 chr6:86172000-86179000 Weak transcription Pancreas Pancrea
11 chr6:86172200-86174600 Weak transcription Primary B cells from cord blood blood
12 chr6:86172200-86179800 Weak transcription Left Ventricle heart
13 chr6:86172200-86186000 Weak transcription Rectal Smooth Muscle rectum
14 chr6:86172400-86175400 Weak transcription Lung lung
15 chr6:86172400-86176200 Enhancers Primary T cells from cord blood blood
16 chr6:86172400-86178000 Weak transcription Aorta Aorta
17 chr6:86172400-86192800 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr6:86172600-86175400 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr6:86173200-86174800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr6:86173200-86174800 Enhancers Brain Anterior Caudate brain
21 chr6:86173200-86176200 Enhancers GM12878-XiMat blood
22 chr6:86173400-86174800 Enhancers Primary hematopoietic stem cells short term culture blood
23 chr6:86173400-86174800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr6:86173400-86174800 Enhancers HepG2 liver
25 chr6:86173400-86175000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr6:86173400-86175000 Flanking Active TSS A549 lung
27 chr6:86173400-86175600 Enhancers Primary hematopoietic stem cells blood
28 chr6:86173400-86176000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
29 chr6:86173600-86175600 Enhancers Primary T helper cells fromperipheralblood blood
30 chr6:86173800-86174600 Enhancers ES-I3 Cell Line embryonic stem cell
31 chr6:86173800-86174600 Enhancers Adipose Nuclei Adipose
32 chr6:86173800-86174800 Enhancers Fetal Adrenal Gland Adrenal Gland
33 chr6:86173800-86175000 Enhancers Primary monocytes fromperipheralblood blood
34 chr6:86173800-86175000 Flanking Active TSS Hela-S3 cervix
35 chr6:86174000-86174600 Enhancers ES-WA7 Cell Line embryonic stem cell
36 chr6:86174000-86174600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
37 chr6:86174000-86174600 Enhancers Fetal Muscle Trunk muscle
38 chr6:86174000-86174800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
39 chr6:86174000-86174800 Bivalent Enhancer Primary T cells fromperipheralblood blood
40 chr6:86174000-86174800 Enhancers Skeletal Muscle Female skeletal muscle
41 chr6:86174000-86175000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
42 chr6:86174000-86175000 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
43 chr6:86174000-86175200 Enhancers Fetal Thymus thymus
44 chr6:86174000-86175600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
45 chr6:86174000-86175800 Enhancers Spleen Spleen
46 chr6:86174000-86176600 Enhancers Placenta Placenta
47 chr6:86174200-86174600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr6:86174200-86174600 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr6:86174200-86174600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
50 chr6:86174200-86174600 Flanking Active TSS HMEC breast

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