Variant report

Variant rs2295890
Chromosome Location chr6:86159462-86159463
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:86157800-86162200 Active TSS Stomach Smooth Muscle stomach
2 chr6:86157800-86162400 Active TSS Colon Smooth Muscle Colon
3 chr6:86158000-86161200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr6:86158000-86162000 Active TSS Aorta Aorta
5 chr6:86158200-86160000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
6 chr6:86158200-86162600 Active TSS NHLF lung
7 chr6:86158400-86162600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
8 chr6:86158600-86160200 Active TSS Breast Myoepithelial Primary Cells Breast
9 chr6:86158600-86160200 Active TSS Brain Hippocampus Middle brain
10 chr6:86158600-86160800 Active TSS Brain Substantia Nigra brain
11 chr6:86158600-86161400 Active TSS Psoas Muscle Psoas
12 chr6:86158600-86161400 Active TSS Rectal Mucosa Donor 29 rectum
13 chr6:86158600-86161600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
14 chr6:86158600-86161600 Active TSS Ovary ovary
15 chr6:86158800-86159800 Active TSS Right Atrium heart
16 chr6:86158800-86160000 Active TSS Muscle Satellite Cultured Cells --
17 chr6:86158800-86160400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr6:86158800-86160400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
19 chr6:86158800-86160600 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr6:86158800-86160600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr6:86158800-86160800 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
22 chr6:86158800-86160800 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
23 chr6:86158800-86161000 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
24 chr6:86158800-86161400 Active TSS NH-A brain
25 chr6:86158800-86161400 Active TSS Osteobl bone
26 chr6:86158800-86161600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
27 chr6:86158800-86161600 Active TSS A549 lung
28 chr6:86158800-86161600 Active TSS HMEC breast
29 chr6:86158800-86161600 Active TSS HSMM muscle
30 chr6:86158800-86161600 Active TSS HSMMtube muscle
31 chr6:86158800-86162000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr6:86158800-86162000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr6:86158800-86162000 Active TSS Rectal Smooth Muscle rectum
34 chr6:86158800-86162000 Active TSS GM12878-XiMat blood
35 chr6:86158800-86162600 Active TSS NHDF-Ad bronchial
36 chr6:86159000-86159600 Flanking Bivalent TSS/Enh H9 Derived Neuron Cultured Cells ES cell derived
37 chr6:86159000-86159600 Bivalent/Poised TSS ES-UCSF4 Cell Line embryonic stem cell
38 chr6:86159000-86159600 Flanking Active TSS Primary B cells from peripheral blood blood
39 chr6:86159000-86159600 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
40 chr6:86159000-86159600 Flanking Bivalent TSS/Enh Primary Natural Killer cells fromperipheralblood blood
41 chr6:86159000-86159600 Enhancers Primary T killer memory cells from peripheral blood blood
42 chr6:86159000-86159600 Bivalent/Poised TSS Brain Germinal Matrix brain
43 chr6:86159000-86159600 Flanking Active TSS Duodenum Mucosa Duodenum
44 chr6:86159000-86159600 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
45 chr6:86159000-86159600 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
46 chr6:86159000-86159800 Bivalent/Poised TSS iPS DF 19.11 Cell Line embryonic stem cell
47 chr6:86159000-86160000 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr6:86159000-86160000 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
49 chr6:86159000-86160000 Bivalent/Poised TSS Fetal Intestine Small intestine
50 chr6:86159000-86160000 Bivalent/Poised TSS Fetal Stomach stomach

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