Variant report

Variant rs4458647
Chromosome Location chr6:86158505-86158506
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:86145400-86159200 Weak transcription Gastric stomach
2 chr6:86152400-86158600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr6:86157400-86158600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr6:86157400-86158800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr6:86157400-86158800 Flanking Active TSS GM12878-XiMat blood
6 chr6:86157400-86158800 Flanking Active TSS Osteobl bone
7 chr6:86157600-86158600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr6:86157600-86158800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr6:86157600-86158800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr6:86157600-86159000 Bivalent Enhancer Primary T cells from cord blood blood
11 chr6:86157600-86159200 Enhancers Primary T killer naive cells fromperipheralblood blood
12 chr6:86157800-86158600 Enhancers Cortex derived primary cultured neurospheres brain
13 chr6:86157800-86158800 Bivalent Enhancer Primary B cells from cord blood blood
14 chr6:86157800-86159000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
15 chr6:86157800-86162200 Active TSS Stomach Smooth Muscle stomach
16 chr6:86157800-86162400 Active TSS Colon Smooth Muscle Colon
17 chr6:86158000-86158600 Active TSS Primary T helper cells PMA-I stimulated --
18 chr6:86158000-86158600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
19 chr6:86158000-86158600 Enhancers Brain Anterior Caudate brain
20 chr6:86158000-86158600 Enhancers HepG2 liver
21 chr6:86158000-86158600 Enhancers HUVEC blood vessel
22 chr6:86158000-86158800 Flanking Active TSS HMEC breast
23 chr6:86158000-86158800 Flanking Active TSS HSMM muscle
24 chr6:86158000-86159000 Flanking Active TSS NHEK skin
25 chr6:86158000-86161200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr6:86158000-86162000 Active TSS Aorta Aorta
27 chr6:86158200-86160000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
28 chr6:86158200-86162600 Active TSS NHLF lung
29 chr6:86158400-86158600 Active TSS Muscle Satellite Cultured Cells --
30 chr6:86158400-86158600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr6:86158400-86158600 Active TSS A549 lung
32 chr6:86158400-86158600 Active TSS NH-A brain
33 chr6:86158400-86158600 Active TSS NHDF-Ad bronchial
34 chr6:86158400-86158800 Flanking Active TSS Rectal Smooth Muscle rectum
35 chr6:86158400-86158800 Flanking Active TSS HSMMtube muscle
36 chr6:86158400-86159000 Active TSS Duodenum Smooth Muscle Duodenum
37 chr6:86158400-86159000 Enhancers Hela-S3 cervix
38 chr6:86158400-86159200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr6:86158400-86159200 Bivalent/Poised TSS Adipose Nuclei Adipose
40 chr6:86158400-86162600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung

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