Variant report

Variant	rs9373056
Chromosome Location	chr6:133797208-133797209
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1022514	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11154730	0.94[ASN][1000 genomes]
rs212771	0.80[AFR][1000 genomes]
rs212774	0.87[AFR][1000 genomes]
rs34950020	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3777866	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs598286	0.84[AFR][1000 genomes]
rs7764488	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9321402	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9385649	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9493627	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133765800-133822000	Weak transcription	Psoas Muscle	Psoas
2	chr6:133782000-133811600	Weak transcription	A549	lung
3	chr6:133782400-133806400	Weak transcription	Fetal Muscle Leg	muscle
4	chr6:133784000-133813000	Weak transcription	HSMMtube	muscle
5	chr6:133786600-133812400	Weak transcription	Fetal Kidney	kidney
6	chr6:133786800-133807400	Weak transcription	Fetal Muscle Trunk	muscle
7	chr6:133787400-133822800	Weak transcription	Fetal Lung	lung
8	chr6:133790800-133807800	Weak transcription	Skeletal Muscle Male	skeletal muscle
9	chr6:133790800-133821600	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr6:133795000-133808400	Weak transcription	Left Ventricle	heart
11	chr6:133795600-133802000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr6:133796200-133797800	Strong transcription	Cortex derived primary cultured neurospheres	brain
13	chr6:133796800-133797400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr6:133797200-133801200	Weak transcription	Hela-S3	cervix

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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