Variant report

Variant	rs9378995
Chromosome Location	chr6:5919146-5919147
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs13197916	0.88[ASN][1000 genomes]
rs1885729	0.83[ASN][1000 genomes]
rs34978519	0.84[ASN][1000 genomes]
rs4960146	0.84[ASN][1000 genomes]
rs6901581	0.84[ASN][1000 genomes]
rs6912637	0.84[ASN][1000 genomes]
rs6919620	0.88[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.97[GIH][hapmap];0.94[JPT][hapmap];0.98[LWK][hapmap];0.88[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap]
rs6935416	0.84[ASN][1000 genomes]
rs7770525	0.84[ASN][1000 genomes]
rs9405882	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.83[MEX][hapmap];1.00[TSI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs998360	0.82[CEU][hapmap];0.91[CHB][hapmap];0.87[AMR][1000 genomes];0.85[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs9378995	LYRM4	cis	parietal	SCAN

Chromatin state (count:0 , 50 per page) page:

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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