The 2.0 version of rSNPBase

Variant report

Variant rs9380375
Chromosome Location chr6:33682391-33682392
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:33679800-33685000 Weak transcription Lung lung
2 chr6:33679800-33685600 Weak transcription Placenta Placenta
3 chr6:33680000-33683000 Weak transcription Stomach Mucosa stomach
4 chr6:33680000-33683800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr6:33680000-33683800 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr6:33680000-33684000 Weak transcription H1 Cell Line embryonic stem cell
7 chr6:33680000-33684000 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr6:33680000-33684000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr6:33680000-33684000 Weak transcription Esophagus oesophagus
10 chr6:33680000-33684000 Weak transcription Gastric stomach
11 chr6:33680000-33684000 Weak transcription Left Ventricle heart
12 chr6:33680000-33684000 Weak transcription HMEC breast
13 chr6:33680000-33684000 Weak transcription NHEK skin
14 chr6:33680000-33684200 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr6:33680000-33684200 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr6:33680000-33684200 Weak transcription Fetal Lung lung
17 chr6:33680000-33684200 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr6:33680000-33684400 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr6:33680000-33684400 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr6:33680000-33684600 Weak transcription Fetal Brain Male brain
21 chr6:33680000-33684600 Weak transcription Fetal Kidney kidney
22 chr6:33680000-33684800 Weak transcription H9 Cell Line embryonic stem cell
23 chr6:33680000-33684800 Weak transcription Colon Smooth Muscle Colon
24 chr6:33680000-33684800 Weak transcription Rectal Smooth Muscle rectum
25 chr6:33680000-33684800 Weak transcription NHLF lung
26 chr6:33680000-33685000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr6:33680000-33685000 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr6:33680000-33685000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr6:33680000-33685000 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr6:33680000-33685000 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr6:33680000-33685000 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr6:33680000-33685200 Weak transcription Right Atrium heart
33 chr6:33680000-33686000 Weak transcription Right Ventricle heart
34 chr6:33680000-33689400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr6:33680000-33690000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr6:33680000-33690200 Weak transcription Psoas Muscle Psoas
37 chr6:33680000-33693000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
38 chr6:33680000-33695200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr6:33680000-33695800 Weak transcription Spleen Spleen
40 chr6:33680000-33696200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr6:33680000-33698400 Weak transcription Placenta Amnion Placenta Amnion
42 chr6:33680000-33705000 Weak transcription Brain Angular Gyrus brain
43 chr6:33680200-33684200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr6:33680200-33685200 Weak transcription Brain Hippocampus Middle brain
45 chr6:33681600-33685800 Enhancers HepG2 liver
46 chr6:33681800-33683200 Enhancers Primary hematopoietic stem cells short term culture blood
47 chr6:33681800-33689200 Enhancers Pancreas Pancrea
48 chr6:33682000-33682600 Enhancers Primary B cells from peripheral blood blood
49 chr6:33682200-33682400 Enhancers Fetal Intestine Large intestine
50 chr6:33682200-33682600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015