The 2.0 version of rSNPBase

Variant report

Variant rs9388809
Chromosome Location chr6:99331962-99331963
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:99294600-99347800 Weak transcription Brain Substantia Nigra brain
2 chr6:99297000-99386000 Weak transcription Fetal Brain Male brain
3 chr6:99298200-99333200 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr6:99298600-99345400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr6:99304000-99358600 Weak transcription Aorta Aorta
6 chr6:99304600-99387200 Weak transcription A549 lung
7 chr6:99309600-99346800 Weak transcription Rectal Smooth Muscle rectum
8 chr6:99309600-99351600 Weak transcription NHDF-Ad bronchial
9 chr6:99309600-99383400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr6:99309800-99377400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr6:99310800-99334400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr6:99311400-99356600 Weak transcription Brain Angular Gyrus brain
13 chr6:99312000-99370800 Weak transcription Esophagus oesophagus
14 chr6:99312600-99333400 Weak transcription Ovary ovary
15 chr6:99312600-99372600 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr6:99312800-99334400 Weak transcription Colon Smooth Muscle Colon
17 chr6:99312800-99340400 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr6:99312800-99340800 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr6:99312800-99351600 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr6:99313600-99333800 Weak transcription Fetal Thymus thymus
21 chr6:99314800-99339600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr6:99315600-99358600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr6:99316800-99345400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr6:99317600-99334400 Weak transcription Primary monocytes fromperipheralblood blood
25 chr6:99318000-99333800 Weak transcription Fetal Brain Female brain
26 chr6:99318000-99346800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr6:99318600-99333800 Weak transcription Brain Inferior Temporal Lobe brain
28 chr6:99318600-99347200 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr6:99318600-99347200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr6:99318600-99355800 Weak transcription Colonic Mucosa Colon
31 chr6:99318800-99346400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr6:99319200-99333800 Weak transcription Right Ventricle heart
33 chr6:99319200-99346800 Weak transcription Psoas Muscle Psoas
34 chr6:99319400-99360000 Weak transcription NH-A brain
35 chr6:99319400-99393600 Weak transcription NHLF lung
36 chr6:99319600-99345400 Weak transcription Muscle Satellite Cultured Cells --
37 chr6:99319800-99333800 Weak transcription Adipose Nuclei Adipose
38 chr6:99320000-99333200 Weak transcription Fetal Stomach stomach
39 chr6:99320200-99333600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr6:99320200-99334000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr6:99320200-99340400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr6:99320200-99379400 Weak transcription NHEK skin
43 chr6:99320400-99393600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr6:99320800-99340600 Weak transcription Fetal Kidney kidney
45 chr6:99321000-99334000 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr6:99321000-99355800 Weak transcription Spleen Spleen
47 chr6:99321000-99369000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr6:99321200-99333600 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr6:99321200-99345400 Weak transcription Fetal Muscle Trunk muscle
50 chr6:99321400-99345600 Weak transcription Lung lung

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Last update: Aug 31, 2015