Variant report

Variant	rs9388969
Chromosome Location	chr6:132593188-132593189
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs1998075	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs62426694	0.92[ASN][1000 genomes]
rs6569778	0.89[YRI][hapmap];0.84[AFR][1000 genomes]
rs6906965	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs7749352	1.00[CEU][hapmap];0.93[EUR][1000 genomes]
rs7756650	0.90[CHB][hapmap];0.85[CHD][hapmap];1.00[JPT][hapmap]
rs9388968	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9402394	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:132589600-132595800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr6:132590000-132595400	Weak transcription	Aorta	Aorta
3	chr6:132592400-132596000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr6:132592600-132595400	Weak transcription	Fetal Intestine Large	intestine
5	chr6:132592600-132595400	Weak transcription	Fetal Intestine Small	intestine
6	chr6:132592600-132595600	Weak transcription	Duodenum Mucosa	Duodenum
7	chr6:132592600-132595800	Weak transcription	Fetal Muscle Leg	muscle
8	chr6:132592600-132596400	Weak transcription	H9 Cell Line	embryonic stem cell
9	chr6:132592800-132595400	Weak transcription	Stomach Mucosa	stomach

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links