Variant report

Variant	rs9394418
Chromosome Location	chr6:37145106-37145107
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:37144419..37146803-chr6:37161414..37163193,2	K562	blood:
2	chr6:37142590..37145563-chr6:37170274..37176000,5	K562	blood:
3	chr6:36996009..36998535-chr6:37144117..37146528,2	K562	blood:
4	chr6:37143067..37148225-chr6:37171800..37179920,10	K562	blood:
5	chr6:37144838..37147064-chr6:37153595..37157045,3	K562	blood:
6	chr6:36993861..36996746-chr6:37142194..37145787,3	K562	blood:
7	chr6:36986026..36986641-chr6:37144661..37145631,2	K562	blood:

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10223418	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11962492	0.93[EUR][1000 genomes]
rs2070892	0.93[EUR][1000 genomes]
rs262911	0.84[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs262914	0.90[ASN][1000 genomes]
rs262915	0.90[ASN][1000 genomes]
rs262931	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3957240	0.89[CHB][hapmap];0.88[CHD][hapmap];0.89[JPT][hapmap];0.82[ASN][1000 genomes]
rs56744613	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs60735182	0.93[EUR][1000 genomes]
rs6457966	1.00[CEU][hapmap]
rs9470519	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:101 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:37141000-37165000	Weak transcription	Right Atrium	heart
2	chr6:37141600-37145200	Weak transcription	Fetal Brain Male	brain
3	chr6:37142600-37145200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr6:37142600-37145200	Weak transcription	Brain Angular Gyrus	brain
5	chr6:37142600-37145200	Weak transcription	Brain Anterior Caudate	brain
6	chr6:37142600-37145400	Weak transcription	Hela-S3	cervix
7	chr6:37142600-37159600	Weak transcription	Fetal Heart	heart
8	chr6:37143000-37145200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr6:37143000-37147800	Weak transcription	Colonic Mucosa	Colon
10	chr6:37143200-37145200	Weak transcription	Brain Germinal Matrix	brain
11	chr6:37143200-37145200	Weak transcription	Small Intestine	intestine
12	chr6:37143200-37146000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr6:37143200-37146800	Enhancers	Primary hematopoietic stem cells	blood
14	chr6:37143200-37147000	Weak transcription	Skeletal Muscle Female	skeletal muscle
15	chr6:37143200-37148000	Weak transcription	H9 Cell Line	embryonic stem cell
16	chr6:37143200-37150600	Weak transcription	Gastric	stomach
17	chr6:37143200-37153000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
18	chr6:37143400-37145200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr6:37143400-37145200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr6:37143400-37145800	Enhancers	Primary T cells from cord blood	blood
21	chr6:37143400-37146000	Weak transcription	Left Ventricle	heart
22	chr6:37143400-37146200	Enhancers	Primary B cells from peripheral blood	blood
23	chr6:37143400-37150400	Weak transcription	Lung	lung
24	chr6:37143400-37150600	Weak transcription	Thymus	Thymus
25	chr6:37143400-37150600	Weak transcription	HepG2	liver
26	chr6:37143400-37155200	Weak transcription	H1 Cell Line	embryonic stem cell
27	chr6:37143400-37159600	Weak transcription	Placenta Amnion	Placenta Amnion
28	chr6:37143600-37145200	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
29	chr6:37143600-37145200	Weak transcription	Right Ventricle	heart
30	chr6:37143600-37145200	Weak transcription	NHEK	skin
31	chr6:37143600-37145400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr6:37143600-37145400	Weak transcription	NHLF	lung
33	chr6:37143600-37145600	Weak transcription	HUVEC	blood vessel
34	chr6:37143600-37145600	Weak transcription	NHDF-Ad	bronchial
35	chr6:37143600-37145800	Enhancers	GM12878-XiMat	blood
36	chr6:37143600-37146200	Enhancers	Primary monocytes fromperipheralblood	blood
37	chr6:37143600-37146400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
38	chr6:37143600-37150600	Weak transcription	Liver	Liver
39	chr6:37143600-37150600	Weak transcription	Fetal Muscle Trunk	muscle
40	chr6:37143600-37150800	Weak transcription	Stomach Smooth Muscle	stomach
41	chr6:37143600-37151200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
42	chr6:37143600-37151800	Weak transcription	Rectal Mucosa Donor 29	rectum
43	chr6:37143800-37145200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
44	chr6:37143800-37145400	Weak transcription	HUES64 Cell Line	embryonic stem cell
45	chr6:37143800-37145400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr6:37143800-37145400	Enhancers	Primary T cells fromperipheralblood	blood
47	chr6:37143800-37145400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
48	chr6:37143800-37145400	Weak transcription	Fetal Intestine Large	intestine
49	chr6:37143800-37145400	Weak transcription	Skeletal Muscle Male	skeletal muscle
50	chr6:37143800-37145400	Weak transcription	HMEC	breast

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