Variant report

Variant	rs9394422
Chromosome Location	chr6:37163288-37163289
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:37151400..37157351-chr6:37157640..37163417,11	K562	blood:
2	chr6:37140365..37143420-chr6:37160123..37163963,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000252687	Chromatin interaction

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10807180	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10947663	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11752000	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1766696	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1766697	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1766698	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2265486	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2482013	0.85[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs2622887	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2622888	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2622889	0.82[EUR][1000 genomes]
rs2776791	0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2776792	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2776794	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2788070	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2788071	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2788072	0.87[EUR][1000 genomes]
rs2788073	0.87[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs2788074	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2842625	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2842626	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2842627	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2842628	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2842629	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2842630	0.81[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs2842631	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2842632	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2842633	0.81[AFR][1000 genomes]
rs900002	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9349030	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9368987	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9368990	0.80[AFR][1000 genomes]
rs9380651	0.86[EUR][1000 genomes]
rs9394421	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9394424	0.84[AFR][1000 genomes]
rs9394425	0.88[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:37141000-37165000	Weak transcription	Right Atrium	heart
2	chr6:37158200-37169800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
3	chr6:37160400-37169000	Weak transcription	Primary T cells fromperipheralblood	blood
4	chr6:37160800-37167400	Weak transcription	Primary hematopoietic stem cells	blood
5	chr6:37162600-37169200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
6	chr6:37162600-37169600	Weak transcription	Primary T cells from cord blood	blood
7	chr6:37162600-37169600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
8	chr6:37162800-37167200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr6:37162800-37167200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr6:37162800-37167400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr6:37162800-37169200	Weak transcription	Primary T helper cells fromperipheralblood	blood
12	chr6:37162800-37169600	Weak transcription	Dnd41	blood

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