Variant report

Variant	rs9400284
Chromosome Location	chr6:109810581-109810582
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs1046943	0.87[ASN][1000 genomes]
rs1054607	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13201430	0.83[ASN][1000 genomes]
rs17070656	0.80[AFR][1000 genomes]
rs2236084	0.87[ASN][1000 genomes]
rs35146243	0.87[ASN][1000 genomes]
rs3734652	0.87[ASN][1000 genomes]
rs3778478	0.87[ASN][1000 genomes]
rs3799842	0.87[ASN][1000 genomes]
rs60640103	0.80[AFR][1000 genomes]
rs6906216	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6920712	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6926096	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6939548	0.87[ASN][1000 genomes]
rs9320289	0.80[AFR][1000 genomes]
rs9320292	0.80[AFR][1000 genomes]
rs9400285	0.80[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9400287	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9791241	0.87[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:109804400-109814200	Weak transcription	Gastric	stomach
2	chr6:109805000-109817000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr6:109805400-109812000	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr6:109805600-109812400	Weak transcription	Brain Angular Gyrus	brain
5	chr6:109806000-109811400	Weak transcription	Dnd41	blood
6	chr6:109806200-109812200	Weak transcription	Primary hematopoietic stem cells	blood
7	chr6:109806800-109812200	Weak transcription	Fetal Muscle Leg	muscle
8	chr6:109807400-109812800	Weak transcription	Placenta	Placenta
9	chr6:109809600-109812600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr6:109809800-109811600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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