Variant report
Variant | rs9320289 |
---|---|
Chromosome Location | chr6:109833336-109833337 |
allele | C/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10080533 | 0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs10434873 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10457201 | 0.92[ASN][1000 genomes] |
rs1054607 | 0.85[AFR][1000 genomes] |
rs10872041 | 0.95[ASN][1000 genomes] |
rs10872047 | 0.92[ASN][1000 genomes] |
rs10872051 | 0.81[ASN][1000 genomes] |
rs10872052 | 0.84[ASN][1000 genomes] |
rs1096139 | 0.82[ASN][1000 genomes] |
rs1096140 | 0.82[ASN][1000 genomes] |
rs1096142 | 0.82[ASN][1000 genomes] |
rs1102924 | 0.82[ASN][1000 genomes] |
rs11153193 | 0.83[ASN][1000 genomes] |
rs11153200 | 0.84[ASN][1000 genomes] |
rs11153201 | 0.84[ASN][1000 genomes] |
rs1115977 | 0.92[ASN][1000 genomes] |
rs11505167 | 1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs11966009 | 0.90[ASN][1000 genomes] |
rs11968485 | 0.84[ASN][1000 genomes] |
rs12215867 | 0.84[ASN][1000 genomes] |
rs12524352 | 0.92[ASN][1000 genomes] |
rs12663674 | 0.84[ASN][1000 genomes] |
rs1303981 | 0.95[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1321327 | 0.85[ASN][1000 genomes] |
rs1358759 | 0.95[ASN][1000 genomes] |
rs1406957 | 0.84[ASN][1000 genomes] |
rs1474959 | 0.92[ASN][1000 genomes] |
rs1570011 | 0.92[ASN][1000 genomes] |
rs1570012 | 0.92[ASN][1000 genomes] |
rs1570013 | 0.89[ASN][1000 genomes] |
rs1575109 | 0.88[ASN][1000 genomes] |
rs1590187 | 0.95[ASN][1000 genomes] |
rs17070656 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1967725 | 0.92[ASN][1000 genomes] |
rs1969710 | 0.87[ASN][1000 genomes] |
rs1969711 | 0.88[ASN][1000 genomes] |
rs1985123 | 0.95[ASN][1000 genomes] |
rs1998812 | 0.95[ASN][1000 genomes] |
rs2016207 | 0.84[ASN][1000 genomes] |
rs2064820 | 0.95[ASN][1000 genomes] |
rs2064821 | 0.84[ASN][1000 genomes] |
rs2076929 | 1.00[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs2275651 | 0.81[EUR][1000 genomes] |
rs2357123 | 0.95[ASN][1000 genomes] |
rs2357125 | 0.92[ASN][1000 genomes] |
rs2357130 | 0.84[ASN][1000 genomes] |
rs2884101 | 0.84[ASN][1000 genomes] |
rs3823235 | 0.85[EUR][1000 genomes] |
rs4454170 | 0.84[ASN][1000 genomes] |
rs4523125 | 0.92[ASN][1000 genomes] |
rs4946986 | 0.95[ASN][1000 genomes] |
rs4946987 | 0.91[ASN][1000 genomes] |
rs4946989 | 0.92[ASN][1000 genomes] |
rs4946991 | 0.91[ASN][1000 genomes] |
rs4946992 | 0.92[ASN][1000 genomes] |
rs4946996 | 0.84[ASN][1000 genomes] |
rs4946999 | 0.84[ASN][1000 genomes] |
rs4947003 | 0.84[ASN][1000 genomes] |
rs60640103 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6568580 | 0.95[ASN][1000 genomes] |
rs6568587 | 0.88[AFR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs6568590 | 0.84[ASN][1000 genomes] |
rs6568594 | 0.82[ASN][1000 genomes] |
rs6568595 | 0.82[ASN][1000 genomes] |
rs67715693 | 0.86[ASN][1000 genomes] |
rs6900091 | 1.00[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs6916239 | 0.93[ASN][1000 genomes] |
rs6916639 | 0.80[ASN][1000 genomes] |
rs6917383 | 1.00[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs6917713 | 0.95[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs6917999 | 0.82[ASN][1000 genomes] |
rs6920712 | 0.89[AFR][1000 genomes] |
rs6925005 | 0.87[AFR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs6927075 | 0.93[AFR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs6929823 | 0.92[ASN][1000 genomes] |
rs6932271 | 1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs6938499 | 0.82[ASN][1000 genomes] |
rs731879 | 0.84[ASN][1000 genomes] |
rs7356790 | 0.86[AFR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs7450970 | 0.84[ASN][1000 genomes] |
rs7453835 | 0.92[ASN][1000 genomes] |
rs7454678 | 0.91[ASN][1000 genomes] |
rs7740192 | 0.86[AFR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs7743159 | 1.00[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs7744981 | 0.84[ASN][1000 genomes] |
rs7745469 | 0.84[ASN][1000 genomes] |
rs7749386 | 0.92[ASN][1000 genomes] |
rs7749605 | 1.00[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs7749910 | 0.84[ASN][1000 genomes] |
rs7751458 | 0.84[ASN][1000 genomes] |
rs7753555 | 1.00[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs7754118 | 0.92[ASN][1000 genomes] |
rs7754606 | 0.92[ASN][1000 genomes] |
rs7761008 | 0.84[ASN][1000 genomes] |
rs7764783 | 0.84[ASN][1000 genomes] |
rs7765265 | 0.84[ASN][1000 genomes] |
rs7765916 | 1.00[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs7767805 | 1.00[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs7768577 | 0.95[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs829815 | 0.82[ASN][1000 genomes] |
rs829816 | 0.82[ASN][1000 genomes] |
rs829818 | 0.82[ASN][1000 genomes] |
rs853544 | 0.82[ASN][1000 genomes] |
rs927127 | 1.00[EUR][1000 genomes] |
rs9320292 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs9320294 | 0.93[ASN][1000 genomes] |
rs9320295 | 0.93[ASN][1000 genomes] |
rs9320296 | 0.93[ASN][1000 genomes] |
rs9320299 | 0.92[ASN][1000 genomes] |
rs9320304 | 0.92[ASN][1000 genomes] |
rs9320305 | 0.92[ASN][1000 genomes] |
rs9372216 | 0.92[ASN][1000 genomes] |
rs9374089 | 0.81[EUR][1000 genomes] |
rs9374092 | 0.95[ASN][1000 genomes] |
rs9374095 | 0.95[ASN][1000 genomes] |
rs9374097 | 0.95[ASN][1000 genomes] |
rs9374099 | 0.95[ASN][1000 genomes] |
rs9374106 | 0.89[EUR][1000 genomes] |
rs9374108 | 0.92[ASN][1000 genomes] |
rs9374113 | 0.84[ASN][1000 genomes] |
rs9374114 | 0.84[ASN][1000 genomes] |
rs9384713 | 0.95[ASN][1000 genomes] |
rs9384715 | 0.92[ASN][1000 genomes] |
rs9384716 | 0.92[ASN][1000 genomes] |
rs9384720 | 0.84[ASN][1000 genomes] |
rs9386805 | 0.81[EUR][1000 genomes] |
rs9386807 | 0.89[EUR][1000 genomes] |
rs9386810 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs9386812 | 0.95[ASN][1000 genomes] |
rs9386813 | 0.95[ASN][1000 genomes] |
rs9386816 | 0.90[ASN][1000 genomes] |
rs9386817 | 0.93[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs9386818 | 0.92[ASN][1000 genomes] |
rs9386823 | 0.92[ASN][1000 genomes] |
rs9386824 | 0.92[ASN][1000 genomes] |
rs9386825 | 0.92[ASN][1000 genomes] |
rs9386826 | 0.86[ASN][1000 genomes] |
rs9386833 | 0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs9398200 | 0.81[EUR][1000 genomes] |
rs9398204 | 0.93[ASN][1000 genomes] |
rs9398205 | 0.94[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs9398206 | 0.92[ASN][1000 genomes] |
rs9400279 | 0.81[EUR][1000 genomes] |
rs9400284 | 0.80[AFR][1000 genomes] |
rs9400286 | 0.89[EUR][1000 genomes] |
rs9400287 | 0.87[AFR][1000 genomes] |
rs9400291 | 0.95[ASN][1000 genomes] |
rs9400293 | 0.83[ASN][1000 genomes] |
rs9400294 | 0.95[ASN][1000 genomes] |
rs9400295 | 0.95[ASN][1000 genomes] |
rs9400299 | 0.89[EUR][1000 genomes] |
rs9400301 | 0.92[ASN][1000 genomes] |
rs9400310 | 0.84[ASN][1000 genomes] |
rs9400312 | 0.84[ASN][1000 genomes] |
rs9400313 | 0.84[ASN][1000 genomes] |
rs9400315 | 0.84[ASN][1000 genomes] |
rs9400316 | 0.84[ASN][1000 genomes] |
rs942923 | 0.95[ASN][1000 genomes] |
rs942924 | 0.95[ASN][1000 genomes] |
rs9480969 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs9480973 | 0.95[ASN][1000 genomes] |
rs9480974 | 0.95[ASN][1000 genomes] |
rs9480976 | 0.95[ASN][1000 genomes] |
rs9480982 | 0.91[ASN][1000 genomes] |
rs9480984 | 0.84[ASN][1000 genomes] |
rs9480985 | 0.84[ASN][1000 genomes] |
rs9480986 | 0.84[ASN][1000 genomes] |
rs9480990 | 1.00[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs9480991 | 0.84[ASN][1000 genomes] |
rs9487141 | 0.95[ASN][1000 genomes] |
rs9487148 | 0.91[ASN][1000 genomes] |
rs9487156 | 0.92[ASN][1000 genomes] |
rs9487160 | 0.90[ASN][1000 genomes] |
rs9487164 | 0.91[ASN][1000 genomes] |
rs9487170 | 0.92[ASN][1000 genomes] |
rs9487171 | 0.91[ASN][1000 genomes] |
rs9487172 | 0.89[ASN][1000 genomes] |
rs9487175 | 0.83[ASN][1000 genomes] |
rs9487176 | 0.84[ASN][1000 genomes] |
rs9487178 | 0.84[ASN][1000 genomes] |
rs9487180 | 0.84[ASN][1000 genomes] |
rs9487186 | 1.00[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs971432 | 0.84[ASN][1000 genomes] |
rs971433 | 0.84[ASN][1000 genomes] |
rs9986423 | 0.84[ASN][1000 genomes] |
rs9986507 | 0.92[ASN][1000 genomes] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:109815800-109837200 | Weak transcription | Primary B cells from cord blood | blood |
2 | chr6:109823400-109834600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
3 | chr6:109825000-109837000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
4 | chr6:109825200-109834600 | Weak transcription | HSMMtube | muscle |
5 | chr6:109829200-109834600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
6 | chr6:109829800-109833400 | ZNF genes & repeats | iPS-15b Cell Line | embryonic stem cell |
7 | chr6:109829800-109834600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
8 | chr6:109830400-109833800 | Weak transcription | Osteobl | bone |
9 | chr6:109831800-109834800 | Weak transcription | Placenta | Placenta |
10 | chr6:109832000-109836400 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
11 | chr6:109832800-109834200 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
12 | chr6:109833000-109835200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
13 | chr6:109833200-109835400 | Enhancers | HUVEC | blood vessel |