Variant report

Variant rs12215867
Chromosome Location chr6:109953266-109953267
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:109928000-109966400 Weak transcription Pancreas Pancrea
2 chr6:109933000-109962800 Weak transcription Left Ventricle heart
3 chr6:109933000-109966400 Weak transcription Brain Germinal Matrix brain
4 chr6:109933000-109985200 Weak transcription Psoas Muscle Psoas
5 chr6:109945400-109966400 Weak transcription Duodenum Mucosa Duodenum
6 chr6:109947200-109966800 Weak transcription Gastric stomach
7 chr6:109947400-109961200 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr6:109948000-109995000 Weak transcription Brain Anterior Caudate brain
9 chr6:109949600-109961200 Weak transcription Lung lung
10 chr6:109949600-109961200 Weak transcription Spleen Spleen
11 chr6:109949800-109954600 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr6:109949800-109956400 Weak transcription Aorta Aorta
13 chr6:109949800-109961200 Weak transcription Fetal Brain Female brain
14 chr6:109950200-109957800 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr6:109950800-109956800 Weak transcription Thymus Thymus
16 chr6:109950800-109958800 Weak transcription Fetal Thymus thymus
17 chr6:109951400-109954000 Strong transcription Primary B cells from cord blood blood
18 chr6:109952200-109961200 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr6:109952600-109953400 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
20 chr6:109952600-109953800 ZNF genes & repeats Liver Liver
21 chr6:109952800-109953800 Strong transcription Primary hematopoietic stem cells blood
22 chr6:109952800-109954000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr6:109953000-109953400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr6:109953000-109954000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
25 chr6:109953000-109954200 Enhancers GM12878-XiMat blood
26 chr6:109953200-109953400 ZNF genes & repeats Ovary ovary
27 chr6:109953200-109953600 Enhancers Primary T cells from cord blood blood
28 chr6:109953200-109953800 Strong transcription Brain Inferior Temporal Lobe brain
29 chr6:109953200-109953800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
30 chr6:109953200-109963000 Weak transcription Stomach Smooth Muscle stomach
31 chr6:109953200-109966200 Weak transcription Fetal Intestine Small intestine

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