Variant report

Variant	rs9386825
Chromosome Location	chr6:109932689-109932690
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:109927783..109929912-chr6:109931522..109933858,2	K562	blood:
2	chr6:109926146..109927722-chr6:109932421..109934095,2	MCF-7	breast:

Extended variants
information (count: 257 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:251)

rs_ID	r²[population]
rs10080533	0.89[ASN][1000 genomes]
rs10434873	0.92[ASN][1000 genomes]
rs10457201	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10872035	0.86[EUR][1000 genomes]
rs10872041	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10872047	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10872051	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10872052	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1096138	0.80[EUR][1000 genomes]
rs1096139	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1096140	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1096142	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1102924	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11153193	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11153194	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11153195	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11153200	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11153201	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1115977	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11505167	0.95[ASN][1000 genomes]
rs11966009	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11968485	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12200787	0.85[EUR][1000 genomes]
rs12202389	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12204769	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12207793	0.88[EUR][1000 genomes]
rs12211805	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12211987	0.85[EUR][1000 genomes]
rs12215867	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12524352	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12663674	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1303981	0.92[ASN][1000 genomes]
rs1321327	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1358759	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1406957	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1474959	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1570011	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1570012	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1570013	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1575108	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1575109	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1590187	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17070656	0.92[ASN][1000 genomes]
rs1885425	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1967725	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1969710	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1969711	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1985123	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1998812	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2016207	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2064820	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2064821	0.86[ASN][1000 genomes]
rs2064822	0.82[EUR][1000 genomes]
rs2076929	0.87[ASN][1000 genomes]
rs2093097	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2145144	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2208210	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2357123	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2357125	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2357127	0.85[EUR][1000 genomes]
rs2357128	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2357129	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2357130	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2884101	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4435980	0.85[EUR][1000 genomes]
rs4454170	0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4523125	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4591898	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4607459	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4945835	0.84[EUR][1000 genomes]
rs4946986	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4946987	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4946989	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4946991	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4946992	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4946993	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4946995	0.82[EUR][1000 genomes]
rs4946996	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4946997	0.83[EUR][1000 genomes]
rs4946998	0.83[EUR][1000 genomes]
rs4946999	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4947003	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4947004	0.81[EUR][1000 genomes]
rs4947006	0.81[EUR][1000 genomes]
rs4947009	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs60640103	0.92[ASN][1000 genomes]
rs62435981	0.87[EUR][1000 genomes]
rs62435982	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6568580	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6568582	0.80[EUR][1000 genomes]
rs6568583	0.85[EUR][1000 genomes]
rs6568587	0.92[ASN][1000 genomes]
rs6568590	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6568591	0.80[EUR][1000 genomes]
rs6568593	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6568594	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6568595	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6568596	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs67715693	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6900091	0.87[ASN][1000 genomes]
rs6910388	0.95[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6916239	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6916639	0.82[ASN][1000 genomes]
rs6917383	0.82[ASN][1000 genomes]
rs6917713	0.95[ASN][1000 genomes]
rs6917999	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6918140	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6921303	0.84[EUR][1000 genomes]
rs6922784	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6924269	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6925005	0.95[ASN][1000 genomes]
rs6925886	0.81[EUR][1000 genomes]
rs6927075	0.95[ASN][1000 genomes]
rs6929823	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6931630	0.85[EUR][1000 genomes]
rs6932271	0.95[ASN][1000 genomes]
rs6932774	0.85[EUR][1000 genomes]
rs6938499	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6938741	0.81[EUR][1000 genomes]
rs71541004	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs731879	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7356790	0.87[ASN][1000 genomes]
rs7450970	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7453835	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7454678	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7454858	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7740192	0.87[ASN][1000 genomes]
rs7743159	0.84[ASN][1000 genomes]
rs7744981	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7745406	0.87[EUR][1000 genomes]
rs7745469	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7749386	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7749605	0.84[ASN][1000 genomes]
rs7749910	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7751458	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7752445	0.85[EUR][1000 genomes]
rs7753555	0.87[ASN][1000 genomes]
rs7754118	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7754606	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7761008	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7764783	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7765265	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7765916	0.84[ASN][1000 genomes]
rs7766766	0.81[EUR][1000 genomes]
rs7767805	0.84[ASN][1000 genomes]
rs7768577	0.95[ASN][1000 genomes]
rs829813	0.86[EUR][1000 genomes]
rs829814	0.88[EUR][1000 genomes]
rs829815	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs829816	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs829817	0.81[EUR][1000 genomes]
rs829818	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs853544	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs911022	0.81[EUR][1000 genomes]
rs911023	0.81[EUR][1000 genomes]
rs9320289	0.92[ASN][1000 genomes]
rs9320292	0.92[ASN][1000 genomes]
rs9320294	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9320295	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9320296	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9320299	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9320300	0.83[EUR][1000 genomes]
rs9320304	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9320305	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9372216	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9372220	0.84[EUR][1000 genomes]
rs9372221	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9372222	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9374092	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9374094	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9374095	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9374096	0.82[EUR][1000 genomes]
rs9374097	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9374098	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9374099	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9374108	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9374110	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs9374113	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9374114	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9384710	0.81[EUR][1000 genomes]
rs9384713	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9384715	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9384716	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9384717	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9384720	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9386810	0.92[ASN][1000 genomes]
rs9386812	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9386813	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9386814	0.82[EUR][1000 genomes]
rs9386816	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9386817	0.95[ASN][1000 genomes]
rs9386818	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9386820	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9386823	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9386824	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9386826	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9386833	0.87[ASN][1000 genomes]
rs9398204	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9398205	0.92[ASN][1000 genomes]
rs9398206	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9400288	0.86[EUR][1000 genomes]
rs9400291	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9400293	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9400294	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9400295	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9400300	0.83[EUR][1000 genomes]
rs9400301	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9400304	0.82[EUR][1000 genomes]
rs9400307	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9400310	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9400312	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9400313	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9400314	0.88[EUR][1000 genomes]
rs9400315	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9400316	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs942923	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs942924	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9480969	0.92[ASN][1000 genomes]
rs9480973	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9480974	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9480976	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9480982	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9480984	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9480985	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9480986	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9480987	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9480990	0.87[ASN][1000 genomes]
rs9480991	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9487141	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9487148	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9487152	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9487153	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9487156	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9487160	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9487164	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9487168	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9487169	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9487170	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9487171	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9487172	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9487175	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9487176	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9487178	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9487179	0.94[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9487180	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9487183	0.86[AFR][1000 genomes];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9487186	0.84[ASN][1000 genomes]
rs971432	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs971433	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9986423	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9986507	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026012	chr6:109851638-109999379	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv604484	chr6:109851937-109997529	ZNF genes & repeats Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv1019389	chr6:109868058-109987502	Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Strong transcription Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv538416	chr6:109868058-109987502	Genic enhancers ZNF genes & repeats Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv917318	chr6:109885195-109982375	Enhancers Weak transcription ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	nsv949475	chr6:109907936-110160501	Weak transcription Enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs9386825	C6orf199	Cis_1M	lymphoblastoid	RTeQTL
rs9386825	SMPD2	cis	Whole Blood	GTEx

Chromatin state (count:45 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:109923600-109952600	Weak transcription	Right Ventricle	heart
2	chr6:109925600-109933000	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr6:109926400-109934200	Weak transcription	Rectal Mucosa Donor 29	rectum
4	chr6:109926600-109934400	Weak transcription	Brain Substantia Nigra	brain
5	chr6:109926800-109935400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
6	chr6:109927600-109935200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
7	chr6:109928000-109966400	Weak transcription	Pancreas	Pancrea
8	chr6:109931600-109934000	Weak transcription	Rectal Smooth Muscle	rectum
9	chr6:109931800-109932800	Weak transcription	Fetal Muscle Trunk	muscle
10	chr6:109932000-109933000	Strong transcription	Brain Germinal Matrix	brain
11	chr6:109932000-109933000	ZNF genes & repeats	Gastric	stomach
12	chr6:109932000-109933000	ZNF genes & repeats	Lung	lung
13	chr6:109932000-109933000	Strong transcription	Psoas Muscle	Psoas
14	chr6:109932000-109933800	Strong transcription	Primary B cells from cord blood	blood
15	chr6:109932200-109933000	Strong transcription	Brain Hippocampus Middle	brain
16	chr6:109932200-109933200	ZNF genes & repeats	Aorta	Aorta
17	chr6:109932200-109936400	Weak transcription	Fetal Kidney	kidney
18	chr6:109932400-109933000	ZNF genes & repeats	Adipose Nuclei	Adipose
19	chr6:109932400-109935800	Weak transcription	Primary T helper cells PMA-I stimulated	--
20	chr6:109932600-109932800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr6:109932600-109932800	Weak transcription	Fetal Thymus	thymus
22	chr6:109932600-109932800	Strong transcription	Skeletal Muscle Female	skeletal muscle
23	chr6:109932600-109933000	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
24	chr6:109932600-109933000	ZNF genes & repeats	Primary B cells from peripheral blood	blood
25	chr6:109932600-109933000	ZNF genes & repeats	Primary hematopoietic stem cells	blood
26	chr6:109932600-109933000	Genic enhancers	Primary T helper cells fromperipheralblood	blood
27	chr6:109932600-109933000	ZNF genes & repeats	Liver	Liver
28	chr6:109932600-109933000	ZNF genes & repeats	Brain Anterior Caudate	brain
29	chr6:109932600-109933000	ZNF genes & repeats	Brain Cingulate Gyrus	brain
30	chr6:109932600-109933000	Strong transcription	Brain Inferior Temporal Lobe	brain
31	chr6:109932600-109933000	ZNF genes & repeats	Duodenum Mucosa	Duodenum
32	chr6:109932600-109933000	ZNF genes & repeats	Esophagus	oesophagus
33	chr6:109932600-109933000	ZNF genes & repeats	Fetal Muscle Leg	muscle
34	chr6:109932600-109933000	ZNF genes & repeats	Fetal Stomach	stomach
35	chr6:109932600-109933000	ZNF genes & repeats	Left Ventricle	heart
36	chr6:109932600-109933000	ZNF genes & repeats	Skeletal Muscle Male	skeletal muscle
37	chr6:109932600-109933000	ZNF genes & repeats	Small Intestine	intestine
38	chr6:109932600-109933000	ZNF genes & repeats	Stomach Smooth Muscle	stomach
39	chr6:109932600-109933000	ZNF genes & repeats	Thymus	Thymus
40	chr6:109932600-109933000	ZNF genes & repeats	Spleen	Spleen
41	chr6:109932600-109933200	ZNF genes & repeats	Brain Angular Gyrus	brain
42	chr6:109932600-109933200	ZNF genes & repeats	Fetal Intestine Small	intestine
43	chr6:109932600-109933400	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
44	chr6:109932600-109933800	Strong transcription	Rectal Mucosa Donor 31	rectum
45	chr6:109932600-109936000	Weak transcription	Primary T cells fromperipheralblood	blood

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