The 2.0 version of rSNPBase

Variant report

Variant rs9436428
Chromosome Location chr1:47770809-47770810
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:47714400-47779200 Weak transcription Small Intestine intestine
2 chr1:47714600-47778400 Weak transcription Fetal Heart heart
3 chr1:47716600-47772600 Strong transcription Dnd41 blood
4 chr1:47723400-47772400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:47731400-47778000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr1:47735400-47779000 Weak transcription Esophagus oesophagus
7 chr1:47741400-47771400 Strong transcription HUES6 Cell Line embryonic stem cell
8 chr1:47742600-47773000 Strong transcription HUES64 Cell Line embryonic stem cell
9 chr1:47742600-47773000 Strong transcription iPS-20b Cell Line embryonic stem cell
10 chr1:47743800-47779200 Weak transcription Brain Hippocampus Middle brain
11 chr1:47744200-47779000 Weak transcription Brain Angular Gyrus brain
12 chr1:47744400-47779000 Weak transcription Brain Inferior Temporal Lobe brain
13 chr1:47744800-47779000 Weak transcription HSMMtube muscle
14 chr1:47746200-47772000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr1:47746200-47778800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr1:47746600-47772200 Weak transcription Ovary ovary
17 chr1:47746600-47776400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr1:47746600-47778400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr1:47746600-47778400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:47746600-47778400 Weak transcription Fetal Brain Female brain
21 chr1:47746800-47778800 Weak transcription Placenta Placenta
22 chr1:47749600-47777800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr1:47750000-47779200 Weak transcription Right Atrium heart
24 chr1:47755200-47779000 Weak transcription Primary B cells from cord blood blood
25 chr1:47755400-47778800 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr1:47757400-47773000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:47757800-47771400 Strong transcription iPS-18 Cell Line embryonic stem cell
28 chr1:47758000-47771000 Strong transcription K562 blood
29 chr1:47760000-47772600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr1:47763400-47778600 Weak transcription Adipose Nuclei Adipose
31 chr1:47763600-47779000 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr1:47763600-47779200 Weak transcription Fetal Brain Male brain
33 chr1:47764200-47779000 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr1:47764200-47779000 Weak transcription Stomach Mucosa stomach
35 chr1:47764400-47772600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr1:47764600-47771000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr1:47765000-47772600 Strong transcription H1 Cell Line embryonic stem cell
38 chr1:47765200-47771200 Strong transcription Primary monocytes fromperipheralblood blood
39 chr1:47765400-47772600 Strong transcription Monocytes-CD14+_RO01746 blood
40 chr1:47765400-47773000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr1:47765400-47777400 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr1:47765600-47779000 Weak transcription Brain Anterior Caudate brain
43 chr1:47765800-47779200 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr1:47766800-47778400 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr1:47767000-47771800 Weak transcription Fetal Intestine Small intestine
46 chr1:47767000-47778800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr1:47767400-47775200 Weak transcription Muscle Satellite Cultured Cells --
48 chr1:47767400-47778000 Weak transcription NHLF lung
49 chr1:47767400-47778600 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr1:47767400-47778800 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015